Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 AC087633.2-202ENST00000565166 1439 ntBASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV9-1A0A075B6T8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 AL645608.8-201ENST00000606034 2086 ntBASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 ABHD17AP5-201ENST00000580133 923 ntBASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 AD000864.1-201ENST00000624076 2295 ntBASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV9-1A0A075B6T8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 AC091799.1-201ENST00000422823 811 ntBASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 AC138907.5-202ENST00000569484 235 ntBASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms