Protein–RNA interactions for Protein: Q9Y6N1

COX11, Cytochrome c oxidase assembly protein COX11, mitochondrial, humanhuman

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX11Q9Y6N1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COX11Q9Y6N1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COX11Q9Y6N1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COX11Q9Y6N1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COX11Q9Y6N1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COX11Q9Y6N1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COX11Q9Y6N1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.33■□□□□ 0.52
COX11Q9Y6N1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COX11Q9Y6N1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COX11Q9Y6N1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COX11Q9Y6N1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
COX11Q9Y6N1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
COX11Q9Y6N1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.32■□□□□ 0.52
COX11Q9Y6N1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COX11Q9Y6N1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COX11Q9Y6N1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COX11Q9Y6N1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COX11Q9Y6N1 AC020928.2-201ENST00000588717 2197 ntBASIC18.32■□□□□ 0.52
COX11Q9Y6N1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
COX11Q9Y6N1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COX11Q9Y6N1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COX11Q9Y6N1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COX11Q9Y6N1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
COX11Q9Y6N1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
COX11Q9Y6N1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC18.31■□□□□ 0.52
COX11Q9Y6N1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COX11Q9Y6N1 AC120057.4-201ENST00000624722 1615 ntBASIC18.31■□□□□ 0.52
COX11Q9Y6N1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.3■□□□□ 0.52
COX11Q9Y6N1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.3■□□□□ 0.52
COX11Q9Y6N1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COX11Q9Y6N1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COX11Q9Y6N1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COX11Q9Y6N1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COX11Q9Y6N1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COX11Q9Y6N1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COX11Q9Y6N1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COX11Q9Y6N1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COX11Q9Y6N1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COX11Q9Y6N1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COX11Q9Y6N1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
COX11Q9Y6N1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COX11Q9Y6N1 AL133380.1-201ENST00000506013 324 ntBASIC18.28■□□□□ 0.52
COX11Q9Y6N1 AC012676.1-201ENST00000574705 1949 ntBASIC18.27■□□□□ 0.52
COX11Q9Y6N1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
COX11Q9Y6N1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
COX11Q9Y6N1 AC097358.2-201ENST00000607541 1159 ntBASIC18.27■□□□□ 0.52
COX11Q9Y6N1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COX11Q9Y6N1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.27■□□□□ 0.52
COX11Q9Y6N1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
COX11Q9Y6N1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
COX11Q9Y6N1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
COX11Q9Y6N1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
COX11Q9Y6N1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
COX11Q9Y6N1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COX11Q9Y6N1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COX11Q9Y6N1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COX11Q9Y6N1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COX11Q9Y6N1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COX11Q9Y6N1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
COX11Q9Y6N1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
COX11Q9Y6N1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.25■□□□□ 0.51
COX11Q9Y6N1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
COX11Q9Y6N1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COX11Q9Y6N1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.25■□□□□ 0.51
COX11Q9Y6N1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.24■□□□□ 0.51
COX11Q9Y6N1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COX11Q9Y6N1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COX11Q9Y6N1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.24■□□□□ 0.51
COX11Q9Y6N1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
COX11Q9Y6N1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COX11Q9Y6N1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COX11Q9Y6N1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COX11Q9Y6N1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
COX11Q9Y6N1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COX11Q9Y6N1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.22■□□□□ 0.51
COX11Q9Y6N1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COX11Q9Y6N1 DRD5P2-201ENST00000421395 2012 ntBASIC18.22■□□□□ 0.51
COX11Q9Y6N1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COX11Q9Y6N1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
COX11Q9Y6N1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COX11Q9Y6N1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC18.21■□□□□ 0.51
COX11Q9Y6N1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.21■□□□□ 0.51
COX11Q9Y6N1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.5
COX11Q9Y6N1 AC079834.2-201ENST00000609776 1949 ntBASIC18.2■□□□□ 0.5
COX11Q9Y6N1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COX11Q9Y6N1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.2■□□□□ 0.5
COX11Q9Y6N1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COX11Q9Y6N1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COX11Q9Y6N1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
COX11Q9Y6N1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
COX11Q9Y6N1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.19■□□□□ 0.5
COX11Q9Y6N1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COX11Q9Y6N1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COX11Q9Y6N1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COX11Q9Y6N1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COX11Q9Y6N1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COX11Q9Y6N1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COX11Q9Y6N1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COX11Q9Y6N1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COX11Q9Y6N1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms