Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
ARFGEF1Q9Y6D6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
ARFGEF1Q9Y6D6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.69
ARFGEF1Q9Y6D6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ARFGEF1Q9Y6D6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
ARFGEF1Q9Y6D6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
ARFGEF1Q9Y6D6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ARFGEF1Q9Y6D6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ARFGEF1Q9Y6D6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC31.81■■■□□ 2.68
ARFGEF1Q9Y6D6 ECEL1P2-201ENST00000461596 1295 ntBASIC31.81■■■□□ 2.68
ARFGEF1Q9Y6D6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31.81■■■□□ 2.68
ARFGEF1Q9Y6D6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31.81■■■□□ 2.68
ARFGEF1Q9Y6D6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC31.81■■■□□ 2.68
ARFGEF1Q9Y6D6 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.8■■■□□ 2.68
ARFGEF1Q9Y6D6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
ARFGEF1Q9Y6D6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
ARFGEF1Q9Y6D6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
ARFGEF1Q9Y6D6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.79■■■□□ 2.68
ARFGEF1Q9Y6D6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC31.79■■■□□ 2.68
ARFGEF1Q9Y6D6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
ARFGEF1Q9Y6D6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
ARFGEF1Q9Y6D6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
ARFGEF1Q9Y6D6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
ARFGEF1Q9Y6D6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
ARFGEF1Q9Y6D6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
ARFGEF1Q9Y6D6 AL161658.1-201ENST00000623641 1967 ntBASIC31.76■■■□□ 2.67
ARFGEF1Q9Y6D6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
ARFGEF1Q9Y6D6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC31.76■■■□□ 2.67
ARFGEF1Q9Y6D6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
ARFGEF1Q9Y6D6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
ARFGEF1Q9Y6D6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
ARFGEF1Q9Y6D6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
ARFGEF1Q9Y6D6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC31.75■■■□□ 2.67
ARFGEF1Q9Y6D6 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ARFGEF1Q9Y6D6 AL592293.1-201ENST00000502889 1188 ntBASIC31.75■■■□□ 2.67
ARFGEF1Q9Y6D6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.75■■■□□ 2.67
ARFGEF1Q9Y6D6 AC110285.7-201ENST00000624417 1536 ntBASIC31.74■■■□□ 2.67
ARFGEF1Q9Y6D6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
ARFGEF1Q9Y6D6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
ARFGEF1Q9Y6D6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.73■■■□□ 2.67
ARFGEF1Q9Y6D6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
ARFGEF1Q9Y6D6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
ARFGEF1Q9Y6D6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
ARFGEF1Q9Y6D6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.72■■■□□ 2.67
ARFGEF1Q9Y6D6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
ARFGEF1Q9Y6D6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
ARFGEF1Q9Y6D6 AC007029.1-201ENST00000604183 313 ntBASIC31.7■■■□□ 2.67
ARFGEF1Q9Y6D6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
ARFGEF1Q9Y6D6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC31.68■■■□□ 2.66
ARFGEF1Q9Y6D6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
ARFGEF1Q9Y6D6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.68■■■□□ 2.66
ARFGEF1Q9Y6D6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31.68■■■□□ 2.66
ARFGEF1Q9Y6D6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
ARFGEF1Q9Y6D6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC31.67■■■□□ 2.66
ARFGEF1Q9Y6D6 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.67■■■□□ 2.66
ARFGEF1Q9Y6D6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
ARFGEF1Q9Y6D6 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.67■■■□□ 2.66
ARFGEF1Q9Y6D6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.66■■■□□ 2.66
ARFGEF1Q9Y6D6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
ARFGEF1Q9Y6D6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
ARFGEF1Q9Y6D6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31.65■■■□□ 2.66
ARFGEF1Q9Y6D6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
ARFGEF1Q9Y6D6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
ARFGEF1Q9Y6D6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.65■■■□□ 2.66
ARFGEF1Q9Y6D6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
ARFGEF1Q9Y6D6 AC009299.2-201ENST00000482477 511 ntBASIC31.65■■■□□ 2.66
ARFGEF1Q9Y6D6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
ARFGEF1Q9Y6D6 AC009831.1-201ENST00000580420 1582 ntBASIC31.62■■■□□ 2.65
ARFGEF1Q9Y6D6 AC127502.1-201ENST00000399971 1502 ntBASIC31.61■■■□□ 2.65
ARFGEF1Q9Y6D6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
ARFGEF1Q9Y6D6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.61■■■□□ 2.65
ARFGEF1Q9Y6D6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ARFGEF1Q9Y6D6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
ARFGEF1Q9Y6D6 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.6■■■□□ 2.65
ARFGEF1Q9Y6D6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC31.6■■■□□ 2.65
ARFGEF1Q9Y6D6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ARFGEF1Q9Y6D6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.6■■■□□ 2.65
ARFGEF1Q9Y6D6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ARFGEF1Q9Y6D6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ARFGEF1Q9Y6D6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
ARFGEF1Q9Y6D6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
ARFGEF1Q9Y6D6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.59■■■□□ 2.65
ARFGEF1Q9Y6D6 AC131212.1-201ENST00000613771 668 ntBASIC31.59■■■□□ 2.65
ARFGEF1Q9Y6D6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ARFGEF1Q9Y6D6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ARFGEF1Q9Y6D6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.58■■■□□ 2.65
ARFGEF1Q9Y6D6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
ARFGEF1Q9Y6D6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
ARFGEF1Q9Y6D6 AC133552.2-201ENST00000619106 1032 ntBASIC31.57■■■□□ 2.64
ARFGEF1Q9Y6D6 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.57■■■□□ 2.64
ARFGEF1Q9Y6D6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
ARFGEF1Q9Y6D6 AC126177.7-201ENST00000547904 679 ntBASIC31.56■■■□□ 2.64
ARFGEF1Q9Y6D6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
ARFGEF1Q9Y6D6 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
ARFGEF1Q9Y6D6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.56■■■□□ 2.64
ARFGEF1Q9Y6D6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
ARFGEF1Q9Y6D6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
ARFGEF1Q9Y6D6 DUX4L18-201ENST00000553347 1267 ntBASIC31.56■■■□□ 2.64
ARFGEF1Q9Y6D6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31.56■■■□□ 2.64
ARFGEF1Q9Y6D6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.56■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms