Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.86■■□□□ 1.73
PCDHB9Q9Y5E1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
PCDHB9Q9Y5E1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.86■■□□□ 1.73
PCDHB9Q9Y5E1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.86■■□□□ 1.73
PCDHB9Q9Y5E1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.86■■□□□ 1.73
PCDHB9Q9Y5E1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
PCDHB9Q9Y5E1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
PCDHB9Q9Y5E1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHB9Q9Y5E1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHB9Q9Y5E1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
PCDHB9Q9Y5E1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.85■■□□□ 1.73
PCDHB9Q9Y5E1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.84■■□□□ 1.73
PCDHB9Q9Y5E1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
PCDHB9Q9Y5E1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHB9Q9Y5E1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHB9Q9Y5E1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHB9Q9Y5E1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.83■■□□□ 1.73
PCDHB9Q9Y5E1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHB9Q9Y5E1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHB9Q9Y5E1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHB9Q9Y5E1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHB9Q9Y5E1 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.83■■□□□ 1.73
PCDHB9Q9Y5E1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHB9Q9Y5E1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHB9Q9Y5E1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.83■■□□□ 1.73
PCDHB9Q9Y5E1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.83■■□□□ 1.73
PCDHB9Q9Y5E1 AC100797.4-201ENST00000631653 1827 ntBASIC25.83■■□□□ 1.73
PCDHB9Q9Y5E1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.72
PCDHB9Q9Y5E1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
PCDHB9Q9Y5E1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.82■■□□□ 1.72
PCDHB9Q9Y5E1 RARRES2P2-201ENST00000394842 485 ntBASIC25.82■■□□□ 1.72
PCDHB9Q9Y5E1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.82■■□□□ 1.72
PCDHB9Q9Y5E1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHB9Q9Y5E1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHB9Q9Y5E1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.81■■□□□ 1.72
PCDHB9Q9Y5E1 ABHD17AP5-201ENST00000580133 923 ntBASIC25.8■■□□□ 1.72
PCDHB9Q9Y5E1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHB9Q9Y5E1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.79■■□□□ 1.72
PCDHB9Q9Y5E1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHB9Q9Y5E1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHB9Q9Y5E1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.79■■□□□ 1.72
PCDHB9Q9Y5E1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.78■■□□□ 1.72
PCDHB9Q9Y5E1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.78■■□□□ 1.72
PCDHB9Q9Y5E1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHB9Q9Y5E1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB9Q9Y5E1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.77■■□□□ 1.72
PCDHB9Q9Y5E1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB9Q9Y5E1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB9Q9Y5E1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.77■■□□□ 1.72
PCDHB9Q9Y5E1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.76■■□□□ 1.71
PCDHB9Q9Y5E1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.75■■□□□ 1.71
PCDHB9Q9Y5E1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHB9Q9Y5E1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.74■■□□□ 1.71
PCDHB9Q9Y5E1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHB9Q9Y5E1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHB9Q9Y5E1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.74■■□□□ 1.71
PCDHB9Q9Y5E1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
PCDHB9Q9Y5E1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHB9Q9Y5E1 GPX1-201ENST00000419349 1106 ntBASIC25.73■■□□□ 1.71
PCDHB9Q9Y5E1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHB9Q9Y5E1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.72■■□□□ 1.71
PCDHB9Q9Y5E1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHB9Q9Y5E1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHB9Q9Y5E1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHB9Q9Y5E1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.71■■□□□ 1.71
PCDHB9Q9Y5E1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.71■■□□□ 1.71
PCDHB9Q9Y5E1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHB9Q9Y5E1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHB9Q9Y5E1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHB9Q9Y5E1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHB9Q9Y5E1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
PCDHB9Q9Y5E1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
PCDHB9Q9Y5E1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHB9Q9Y5E1 AC110285.7-201ENST00000624417 1536 ntBASIC25.7■■□□□ 1.7
PCDHB9Q9Y5E1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHB9Q9Y5E1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.69■■□□□ 1.7
PCDHB9Q9Y5E1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHB9Q9Y5E1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.69■■□□□ 1.7
PCDHB9Q9Y5E1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.69■■□□□ 1.7
PCDHB9Q9Y5E1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.69■■□□□ 1.7
PCDHB9Q9Y5E1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
PCDHB9Q9Y5E1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.68■■□□□ 1.7
PCDHB9Q9Y5E1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHB9Q9Y5E1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHB9Q9Y5E1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHB9Q9Y5E1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHB9Q9Y5E1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHB9Q9Y5E1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHB9Q9Y5E1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHB9Q9Y5E1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHB9Q9Y5E1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHB9Q9Y5E1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.66■■□□□ 1.7
PCDHB9Q9Y5E1 RNF126P1-201ENST00000567452 1320 ntBASIC25.65■■□□□ 1.7
PCDHB9Q9Y5E1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHB9Q9Y5E1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHB9Q9Y5E1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.65■■□□□ 1.7
PCDHB9Q9Y5E1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHB9Q9Y5E1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHB9Q9Y5E1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHB9Q9Y5E1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms