Protein–RNA interactions for Protein: Q9Y3Q8

TSC22D4, TSC22 domain family protein 4, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4Q9Y3Q8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TSC22D4Q9Y3Q8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TSC22D4Q9Y3Q8 AP002414.2-202ENST00000590929 1450 ntBASIC24.47■■□□□ 1.51
TSC22D4Q9Y3Q8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.47■■□□□ 1.51
TSC22D4Q9Y3Q8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TSC22D4Q9Y3Q8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TSC22D4Q9Y3Q8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.47■■□□□ 1.51
TSC22D4Q9Y3Q8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
TSC22D4Q9Y3Q8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.46■■□□□ 1.51
TSC22D4Q9Y3Q8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.45■■□□□ 1.51
TSC22D4Q9Y3Q8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TSC22D4Q9Y3Q8 AC021231.2-201ENST00000594613 730 ntBASIC24.45■■□□□ 1.5
TSC22D4Q9Y3Q8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
TSC22D4Q9Y3Q8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
TSC22D4Q9Y3Q8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
TSC22D4Q9Y3Q8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
TSC22D4Q9Y3Q8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TSC22D4Q9Y3Q8 DUX4L29-201ENST00000425409 679 ntBASIC24.44■■□□□ 1.5
TSC22D4Q9Y3Q8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TSC22D4Q9Y3Q8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TSC22D4Q9Y3Q8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
TSC22D4Q9Y3Q8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TSC22D4Q9Y3Q8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.43■■□□□ 1.5
TSC22D4Q9Y3Q8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
TSC22D4Q9Y3Q8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TSC22D4Q9Y3Q8 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
TSC22D4Q9Y3Q8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
TSC22D4Q9Y3Q8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TSC22D4Q9Y3Q8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TSC22D4Q9Y3Q8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
TSC22D4Q9Y3Q8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TSC22D4Q9Y3Q8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
TSC22D4Q9Y3Q8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.39■■□□□ 1.5
TSC22D4Q9Y3Q8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TSC22D4Q9Y3Q8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TSC22D4Q9Y3Q8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.39■■□□□ 1.49
TSC22D4Q9Y3Q8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.38■■□□□ 1.49
TSC22D4Q9Y3Q8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TSC22D4Q9Y3Q8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.37■■□□□ 1.49
TSC22D4Q9Y3Q8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TSC22D4Q9Y3Q8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TSC22D4Q9Y3Q8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.37■■□□□ 1.49
TSC22D4Q9Y3Q8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TSC22D4Q9Y3Q8 BX255925.1-201ENST00000566954 1854 ntBASIC24.36■■□□□ 1.49
TSC22D4Q9Y3Q8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TSC22D4Q9Y3Q8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
TSC22D4Q9Y3Q8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.36■■□□□ 1.49
TSC22D4Q9Y3Q8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TSC22D4Q9Y3Q8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.36■■□□□ 1.49
TSC22D4Q9Y3Q8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TSC22D4Q9Y3Q8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TSC22D4Q9Y3Q8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TSC22D4Q9Y3Q8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TSC22D4Q9Y3Q8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TSC22D4Q9Y3Q8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.33■■□□□ 1.49
TSC22D4Q9Y3Q8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
TSC22D4Q9Y3Q8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
TSC22D4Q9Y3Q8 AC018358.1-201ENST00000631079 1402 ntBASIC24.32■■□□□ 1.48
TSC22D4Q9Y3Q8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TSC22D4Q9Y3Q8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TSC22D4Q9Y3Q8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TSC22D4Q9Y3Q8 LINC01003-201ENST00000564834 1764 ntBASIC24.31■■□□□ 1.48
TSC22D4Q9Y3Q8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
TSC22D4Q9Y3Q8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.31■■□□□ 1.48
TSC22D4Q9Y3Q8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TSC22D4Q9Y3Q8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
TSC22D4Q9Y3Q8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.31■■□□□ 1.48
TSC22D4Q9Y3Q8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.3■■□□□ 1.48
TSC22D4Q9Y3Q8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TSC22D4Q9Y3Q8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TSC22D4Q9Y3Q8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
TSC22D4Q9Y3Q8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TSC22D4Q9Y3Q8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TSC22D4Q9Y3Q8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.28■■□□□ 1.48
TSC22D4Q9Y3Q8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.28■■□□□ 1.48
TSC22D4Q9Y3Q8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.28■■□□□ 1.48
TSC22D4Q9Y3Q8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TSC22D4Q9Y3Q8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.28■■□□□ 1.48
TSC22D4Q9Y3Q8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.28■■□□□ 1.48
TSC22D4Q9Y3Q8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
TSC22D4Q9Y3Q8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TSC22D4Q9Y3Q8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TSC22D4Q9Y3Q8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
TSC22D4Q9Y3Q8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TSC22D4Q9Y3Q8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
TSC22D4Q9Y3Q8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.25■■□□□ 1.47
TSC22D4Q9Y3Q8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
TSC22D4Q9Y3Q8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
TSC22D4Q9Y3Q8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.25■■□□□ 1.47
TSC22D4Q9Y3Q8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TSC22D4Q9Y3Q8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.24■■□□□ 1.47
TSC22D4Q9Y3Q8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.24■■□□□ 1.47
TSC22D4Q9Y3Q8 LINC01971-201ENST00000617888 1048 ntBASIC24.24■■□□□ 1.47
TSC22D4Q9Y3Q8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
TSC22D4Q9Y3Q8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TSC22D4Q9Y3Q8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TSC22D4Q9Y3Q8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.23■■□□□ 1.47
TSC22D4Q9Y3Q8 AC110285.7-201ENST00000624417 1536 ntBASIC24.23■■□□□ 1.47
TSC22D4Q9Y3Q8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
TSC22D4Q9Y3Q8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms