Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
COMMD9Q9P000 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
COMMD9Q9P000 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COMMD9Q9P000 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.35■■□□□ 1.01
COMMD9Q9P000 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COMMD9Q9P000 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
COMMD9Q9P000 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COMMD9Q9P000 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
COMMD9Q9P000 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
COMMD9Q9P000 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
COMMD9Q9P000 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COMMD9Q9P000 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COMMD9Q9P000 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COMMD9Q9P000 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COMMD9Q9P000 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
COMMD9Q9P000 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.32■■□□□ 1
COMMD9Q9P000 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.32■■□□□ 1
COMMD9Q9P000 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COMMD9Q9P000 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COMMD9Q9P000 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
COMMD9Q9P000 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COMMD9Q9P000 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.3■■□□□ 1
COMMD9Q9P000 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COMMD9Q9P000 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COMMD9Q9P000 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COMMD9Q9P000 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
COMMD9Q9P000 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
COMMD9Q9P000 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COMMD9Q9P000 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
COMMD9Q9P000 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COMMD9Q9P000 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COMMD9Q9P000 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.28■■□□□ 1
COMMD9Q9P000 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
COMMD9Q9P000 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
COMMD9Q9P000 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.27■■□□□ 1
COMMD9Q9P000 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.27■■□□□ 1
COMMD9Q9P000 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
COMMD9Q9P000 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.27■■□□□ 1
COMMD9Q9P000 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
COMMD9Q9P000 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COMMD9Q9P000 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.26■□□□□ 0.99
COMMD9Q9P000 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
COMMD9Q9P000 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COMMD9Q9P000 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.26■□□□□ 0.99
COMMD9Q9P000 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.26■□□□□ 0.99
COMMD9Q9P000 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
COMMD9Q9P000 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
COMMD9Q9P000 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COMMD9Q9P000 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COMMD9Q9P000 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.25■□□□□ 0.99
COMMD9Q9P000 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
COMMD9Q9P000 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
COMMD9Q9P000 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
COMMD9Q9P000 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COMMD9Q9P000 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
COMMD9Q9P000 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COMMD9Q9P000 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COMMD9Q9P000 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.24■□□□□ 0.99
COMMD9Q9P000 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.23■□□□□ 0.99
COMMD9Q9P000 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COMMD9Q9P000 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.23■□□□□ 0.99
COMMD9Q9P000 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.23■□□□□ 0.99
COMMD9Q9P000 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COMMD9Q9P000 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
COMMD9Q9P000 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
COMMD9Q9P000 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
COMMD9Q9P000 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.22■□□□□ 0.99
COMMD9Q9P000 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COMMD9Q9P000 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.22■□□□□ 0.99
COMMD9Q9P000 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COMMD9Q9P000 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
COMMD9Q9P000 AC010864.1-201ENST00000609407 1511 ntBASIC21.21■□□□□ 0.99
COMMD9Q9P000 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COMMD9Q9P000 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COMMD9Q9P000 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COMMD9Q9P000 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COMMD9Q9P000 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.2■□□□□ 0.98
COMMD9Q9P000 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.2■□□□□ 0.98
COMMD9Q9P000 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COMMD9Q9P000 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
COMMD9Q9P000 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.2■□□□□ 0.98
COMMD9Q9P000 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD9Q9P000 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD9Q9P000 LINC01003-201ENST00000564834 1764 ntBASIC21.19■□□□□ 0.98
COMMD9Q9P000 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD9Q9P000 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD9Q9P000 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD9Q9P000 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
COMMD9Q9P000 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COMMD9Q9P000 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COMMD9Q9P000 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.18■□□□□ 0.98
COMMD9Q9P000 AC091060.1-201ENST00000623524 1766 ntBASIC21.18■□□□□ 0.98
COMMD9Q9P000 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD9Q9P000 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.17■□□□□ 0.98
COMMD9Q9P000 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD9Q9P000 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.17■□□□□ 0.98
COMMD9Q9P000 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
COMMD9Q9P000 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD9Q9P000 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.16■□□□□ 0.98
COMMD9Q9P000 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms