Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CDC42SE2Q9NRR3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDC42SE2Q9NRR3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.45■□□□□ 0.38
CDC42SE2Q9NRR3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDC42SE2Q9NRR3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC17.44■□□□□ 0.38
CDC42SE2Q9NRR3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC17.44■□□□□ 0.38
CDC42SE2Q9NRR3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDC42SE2Q9NRR3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CDC42SE2Q9NRR3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC42SE2Q9NRR3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC42SE2Q9NRR3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC42SE2Q9NRR3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.43■□□□□ 0.38
CDC42SE2Q9NRR3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDC42SE2Q9NRR3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.42■□□□□ 0.38
CDC42SE2Q9NRR3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDC42SE2Q9NRR3 MIR762-201ENST00000390236 83 ntBASIC17.42■□□□□ 0.38
CDC42SE2Q9NRR3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC17.42■□□□□ 0.38
CDC42SE2Q9NRR3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.42■□□□□ 0.38
CDC42SE2Q9NRR3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDC42SE2Q9NRR3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC17.41■□□□□ 0.38
CDC42SE2Q9NRR3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42SE2Q9NRR3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42SE2Q9NRR3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42SE2Q9NRR3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDC42SE2Q9NRR3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDC42SE2Q9NRR3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.4■□□□□ 0.38
CDC42SE2Q9NRR3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC17.4■□□□□ 0.38
CDC42SE2Q9NRR3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.4■□□□□ 0.38
CDC42SE2Q9NRR3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC17.4■□□□□ 0.38
CDC42SE2Q9NRR3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDC42SE2Q9NRR3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDC42SE2Q9NRR3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.39■□□□□ 0.37
CDC42SE2Q9NRR3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC17.39■□□□□ 0.37
CDC42SE2Q9NRR3 CHML-205ENST00000638160 705 ntTSL 3 BASIC17.39■□□□□ 0.37
CDC42SE2Q9NRR3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDC42SE2Q9NRR3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.38■□□□□ 0.37
CDC42SE2Q9NRR3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDC42SE2Q9NRR3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CDC42SE2Q9NRR3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42SE2Q9NRR3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42SE2Q9NRR3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC17.37■□□□□ 0.37
CDC42SE2Q9NRR3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42SE2Q9NRR3 AC018358.1-201ENST00000631079 1402 ntBASIC17.37■□□□□ 0.37
CDC42SE2Q9NRR3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.37■□□□□ 0.37
CDC42SE2Q9NRR3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42SE2Q9NRR3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC42SE2Q9NRR3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC42SE2Q9NRR3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC42SE2Q9NRR3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDC42SE2Q9NRR3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC17.36■□□□□ 0.37
CDC42SE2Q9NRR3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC42SE2Q9NRR3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC42SE2Q9NRR3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CDC42SE2Q9NRR3 AC135983.2-203ENST00000454486 1613 ntBASIC17.36■□□□□ 0.37
CDC42SE2Q9NRR3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CDC42SE2Q9NRR3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42SE2Q9NRR3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42SE2Q9NRR3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42SE2Q9NRR3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17.35■□□□□ 0.37
CDC42SE2Q9NRR3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC17.35■□□□□ 0.37
CDC42SE2Q9NRR3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42SE2Q9NRR3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42SE2Q9NRR3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42SE2Q9NRR3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42SE2Q9NRR3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42SE2Q9NRR3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC17.34■□□□□ 0.37
CDC42SE2Q9NRR3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42SE2Q9NRR3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDC42SE2Q9NRR3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDC42SE2Q9NRR3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42SE2Q9NRR3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDC42SE2Q9NRR3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CDC42SE2Q9NRR3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDC42SE2Q9NRR3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42SE2Q9NRR3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.31■□□□□ 0.36
CDC42SE2Q9NRR3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42SE2Q9NRR3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.31■□□□□ 0.36
CDC42SE2Q9NRR3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42SE2Q9NRR3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CDC42SE2Q9NRR3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42SE2Q9NRR3 AL449106.1-201ENST00000608517 1980 ntBASIC17.31■□□□□ 0.36
CDC42SE2Q9NRR3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42SE2Q9NRR3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDC42SE2Q9NRR3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDC42SE2Q9NRR3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDC42SE2Q9NRR3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC42SE2Q9NRR3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CDC42SE2Q9NRR3 AC005559.1-201ENST00000589661 871 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms