Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
MRM3Q9HC36 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.51■■□□□ 1.67
MRM3Q9HC36 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
MRM3Q9HC36 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
MRM3Q9HC36 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
MRM3Q9HC36 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
MRM3Q9HC36 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
MRM3Q9HC36 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.49■■□□□ 1.67
MRM3Q9HC36 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
MRM3Q9HC36 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
MRM3Q9HC36 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
MRM3Q9HC36 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
MRM3Q9HC36 AC018358.1-201ENST00000631079 1402 ntBASIC25.48■■□□□ 1.67
MRM3Q9HC36 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
MRM3Q9HC36 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
MRM3Q9HC36 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
MRM3Q9HC36 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
MRM3Q9HC36 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
MRM3Q9HC36 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
MRM3Q9HC36 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
MRM3Q9HC36 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
MRM3Q9HC36 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
MRM3Q9HC36 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MRM3Q9HC36 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
MRM3Q9HC36 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
MRM3Q9HC36 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
MRM3Q9HC36 AL121749.1-202ENST00000609313 2153 ntBASIC25.44■■□□□ 1.66
MRM3Q9HC36 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
MRM3Q9HC36 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.44■■□□□ 1.66
MRM3Q9HC36 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
MRM3Q9HC36 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
MRM3Q9HC36 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.43■■□□□ 1.66
MRM3Q9HC36 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
MRM3Q9HC36 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
MRM3Q9HC36 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
MRM3Q9HC36 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
MRM3Q9HC36 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
MRM3Q9HC36 AC021231.2-201ENST00000594613 730 ntBASIC25.42■■□□□ 1.66
MRM3Q9HC36 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
MRM3Q9HC36 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
MRM3Q9HC36 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.41■■□□□ 1.66
MRM3Q9HC36 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.41■■□□□ 1.66
MRM3Q9HC36 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
MRM3Q9HC36 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
MRM3Q9HC36 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
MRM3Q9HC36 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
MRM3Q9HC36 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
MRM3Q9HC36 DUX4L29-201ENST00000425409 679 ntBASIC25.39■■□□□ 1.66
MRM3Q9HC36 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
MRM3Q9HC36 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
MRM3Q9HC36 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.38■■□□□ 1.65
MRM3Q9HC36 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
MRM3Q9HC36 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
MRM3Q9HC36 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
MRM3Q9HC36 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
MRM3Q9HC36 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
MRM3Q9HC36 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.35■■□□□ 1.65
MRM3Q9HC36 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
MRM3Q9HC36 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
MRM3Q9HC36 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
MRM3Q9HC36 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
MRM3Q9HC36 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.35■■□□□ 1.65
MRM3Q9HC36 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
MRM3Q9HC36 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
MRM3Q9HC36 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.34■■□□□ 1.65
MRM3Q9HC36 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
MRM3Q9HC36 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
MRM3Q9HC36 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
MRM3Q9HC36 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
MRM3Q9HC36 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
MRM3Q9HC36 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.33■■□□□ 1.65
MRM3Q9HC36 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.64
MRM3Q9HC36 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
MRM3Q9HC36 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
MRM3Q9HC36 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
MRM3Q9HC36 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
MRM3Q9HC36 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.32■■□□□ 1.64
MRM3Q9HC36 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.31■■□□□ 1.64
MRM3Q9HC36 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
MRM3Q9HC36 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MRM3Q9HC36 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
MRM3Q9HC36 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
MRM3Q9HC36 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.3■■□□□ 1.64
MRM3Q9HC36 AC110285.7-201ENST00000624417 1536 ntBASIC25.3■■□□□ 1.64
MRM3Q9HC36 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
MRM3Q9HC36 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
MRM3Q9HC36 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
MRM3Q9HC36 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
MRM3Q9HC36 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
MRM3Q9HC36 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
MRM3Q9HC36 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
MRM3Q9HC36 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.29■■□□□ 1.64
MRM3Q9HC36 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.29■■□□□ 1.64
MRM3Q9HC36 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.29■■□□□ 1.64
MRM3Q9HC36 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
MRM3Q9HC36 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
MRM3Q9HC36 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MRM3Q9HC36 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
MRM3Q9HC36 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MRM3Q9HC36 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms