Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 DUX4L22-201ENST00000618238 1269 ntBASIC22.12■■□□□ 1.13
CDH20Q9HBT6 DUX4L20-201ENST00000619712 1269 ntBASIC22.12■■□□□ 1.13
CDH20Q9HBT6 DUX4L21-201ENST00000622058 1269 ntBASIC22.12■■□□□ 1.13
CDH20Q9HBT6 DUX4L10-201ENST00000622460 1267 ntBASIC22.12■■□□□ 1.13
CDH20Q9HBT6 DUX4L25-201ENST00000624915 1269 ntBASIC22.12■■□□□ 1.13
CDH20Q9HBT6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CDH20Q9HBT6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CDH20Q9HBT6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDH20Q9HBT6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.12■■□□□ 1.13
CDH20Q9HBT6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDH20Q9HBT6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.11■■□□□ 1.13
CDH20Q9HBT6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
CDH20Q9HBT6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.1■■□□□ 1.13
CDH20Q9HBT6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDH20Q9HBT6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.1■■□□□ 1.13
CDH20Q9HBT6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.1■■□□□ 1.13
CDH20Q9HBT6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDH20Q9HBT6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.09■■□□□ 1.13
CDH20Q9HBT6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDH20Q9HBT6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.09■■□□□ 1.13
CDH20Q9HBT6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDH20Q9HBT6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CDH20Q9HBT6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDH20Q9HBT6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CDH20Q9HBT6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.13
CDH20Q9HBT6 AC110285.7-201ENST00000624417 1536 ntBASIC22.07■■□□□ 1.12
CDH20Q9HBT6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CDH20Q9HBT6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CDH20Q9HBT6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CDH20Q9HBT6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDH20Q9HBT6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDH20Q9HBT6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.07■■□□□ 1.12
CDH20Q9HBT6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDH20Q9HBT6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.06■■□□□ 1.12
CDH20Q9HBT6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDH20Q9HBT6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDH20Q9HBT6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDH20Q9HBT6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDH20Q9HBT6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDH20Q9HBT6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.05■■□□□ 1.12
CDH20Q9HBT6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
CDH20Q9HBT6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.04■■□□□ 1.12
CDH20Q9HBT6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDH20Q9HBT6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDH20Q9HBT6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDH20Q9HBT6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CDH20Q9HBT6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.03■■□□□ 1.12
CDH20Q9HBT6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDH20Q9HBT6 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.03■■□□□ 1.12
CDH20Q9HBT6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.03■■□□□ 1.12
CDH20Q9HBT6 CR559946.2-201ENST00000623684 991 ntBASIC22.03■■□□□ 1.12
CDH20Q9HBT6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDH20Q9HBT6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDH20Q9HBT6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDH20Q9HBT6 MIR3648-2-201ENST00000581792 180 ntBASIC22.02■■□□□ 1.12
CDH20Q9HBT6 MIR3648-1-201ENST00000615959 180 ntBASIC22.02■■□□□ 1.12
CDH20Q9HBT6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CDH20Q9HBT6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDH20Q9HBT6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CDH20Q9HBT6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22■■□□□ 1.11
CDH20Q9HBT6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22■■□□□ 1.11
CDH20Q9HBT6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CDH20Q9HBT6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDH20Q9HBT6 AC016575.1-201ENST00000607026 382 ntBASIC21.99■■□□□ 1.11
CDH20Q9HBT6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDH20Q9HBT6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDH20Q9HBT6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH20Q9HBT6 AP002414.2-202ENST00000590929 1450 ntBASIC21.98■■□□□ 1.11
CDH20Q9HBT6 DRD5P2-201ENST00000421395 2012 ntBASIC21.98■■□□□ 1.11
CDH20Q9HBT6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH20Q9HBT6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.98■■□□□ 1.11
CDH20Q9HBT6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH20Q9HBT6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH20Q9HBT6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CDH20Q9HBT6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.97■■□□□ 1.11
CDH20Q9HBT6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.97■■□□□ 1.11
CDH20Q9HBT6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH20Q9HBT6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH20Q9HBT6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH20Q9HBT6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH20Q9HBT6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDH20Q9HBT6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDH20Q9HBT6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDH20Q9HBT6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
CDH20Q9HBT6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDH20Q9HBT6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.95■■□□□ 1.1
CDH20Q9HBT6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDH20Q9HBT6 HLA-V-202ENST00000446817 847 ntBASIC21.95■■□□□ 1.1
CDH20Q9HBT6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.95■■□□□ 1.1
CDH20Q9HBT6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDH20Q9HBT6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDH20Q9HBT6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDH20Q9HBT6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDH20Q9HBT6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDH20Q9HBT6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDH20Q9HBT6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDH20Q9HBT6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDH20Q9HBT6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.93■■□□□ 1.1
CDH20Q9HBT6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CDH20Q9HBT6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms