Protein–RNA interactions for Protein: Q9C099

LRRCC1, Leucine-rich repeat and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRCC1Q9C099 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
LRRCC1Q9C099 AP002414.2-202ENST00000590929 1450 ntBASIC31.46■■■□□ 2.63
LRRCC1Q9C099 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
LRRCC1Q9C099 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
LRRCC1Q9C099 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
LRRCC1Q9C099 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
LRRCC1Q9C099 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.45■■■□□ 2.63
LRRCC1Q9C099 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
LRRCC1Q9C099 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
LRRCC1Q9C099 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.43■■■□□ 2.62
LRRCC1Q9C099 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
LRRCC1Q9C099 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.42■■■□□ 2.62
LRRCC1Q9C099 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
LRRCC1Q9C099 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.41■■■□□ 2.62
LRRCC1Q9C099 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.41■■■□□ 2.62
LRRCC1Q9C099 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
LRRCC1Q9C099 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
LRRCC1Q9C099 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
LRRCC1Q9C099 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.39■■■□□ 2.62
LRRCC1Q9C099 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
LRRCC1Q9C099 AC110285.7-201ENST00000624417 1536 ntBASIC31.39■■■□□ 2.61
LRRCC1Q9C099 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC31.38■■■□□ 2.61
LRRCC1Q9C099 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
LRRCC1Q9C099 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
LRRCC1Q9C099 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
LRRCC1Q9C099 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
LRRCC1Q9C099 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
LRRCC1Q9C099 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
LRRCC1Q9C099 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
LRRCC1Q9C099 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
LRRCC1Q9C099 DUX4L11-201ENST00000611504 1267 ntBASIC31.36■■■□□ 2.61
LRRCC1Q9C099 DUX4L12-201ENST00000614593 1267 ntBASIC31.36■■■□□ 2.61
LRRCC1Q9C099 DUX4L14-201ENST00000621227 1267 ntBASIC31.36■■■□□ 2.61
LRRCC1Q9C099 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.36■■■□□ 2.61
LRRCC1Q9C099 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
LRRCC1Q9C099 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
LRRCC1Q9C099 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.35■■■□□ 2.61
LRRCC1Q9C099 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
LRRCC1Q9C099 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
LRRCC1Q9C099 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.33■■■□□ 2.61
LRRCC1Q9C099 DUX4L13-201ENST00000554103 1267 ntBASIC31.33■■■□□ 2.61
LRRCC1Q9C099 DUX4L15-201ENST00000611059 1267 ntBASIC31.33■■■□□ 2.61
LRRCC1Q9C099 DUX4L23-201ENST00000615195 1269 ntBASIC31.33■■■□□ 2.61
LRRCC1Q9C099 DUX4L24-201ENST00000617576 1269 ntBASIC31.33■■■□□ 2.61
LRRCC1Q9C099 DUX4L22-201ENST00000618238 1269 ntBASIC31.33■■■□□ 2.61
LRRCC1Q9C099 DUX4L20-201ENST00000619712 1269 ntBASIC31.33■■■□□ 2.61
LRRCC1Q9C099 DUX4L21-201ENST00000622058 1269 ntBASIC31.33■■■□□ 2.61
LRRCC1Q9C099 DUX4L10-201ENST00000622460 1267 ntBASIC31.33■■■□□ 2.61
LRRCC1Q9C099 DUX4L25-201ENST00000624915 1269 ntBASIC31.33■■■□□ 2.61
LRRCC1Q9C099 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
LRRCC1Q9C099 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
LRRCC1Q9C099 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
LRRCC1Q9C099 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.33■■■□□ 2.61
LRRCC1Q9C099 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
LRRCC1Q9C099 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.31■■■□□ 2.6
LRRCC1Q9C099 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.31■■■□□ 2.6
LRRCC1Q9C099 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.31■■■□□ 2.6
LRRCC1Q9C099 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
LRRCC1Q9C099 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.3■■■□□ 2.6
LRRCC1Q9C099 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
LRRCC1Q9C099 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
LRRCC1Q9C099 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
LRRCC1Q9C099 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
LRRCC1Q9C099 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
LRRCC1Q9C099 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
LRRCC1Q9C099 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
LRRCC1Q9C099 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
LRRCC1Q9C099 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
LRRCC1Q9C099 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.27■■■□□ 2.6
LRRCC1Q9C099 LINC01003-201ENST00000564834 1764 ntBASIC31.25■■■□□ 2.59
LRRCC1Q9C099 BX255925.1-201ENST00000566954 1854 ntBASIC31.25■■■□□ 2.59
LRRCC1Q9C099 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.25■■■□□ 2.59
LRRCC1Q9C099 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.24■■■□□ 2.59
LRRCC1Q9C099 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
LRRCC1Q9C099 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
LRRCC1Q9C099 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
LRRCC1Q9C099 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
LRRCC1Q9C099 AC018358.1-201ENST00000631079 1402 ntBASIC31.24■■■□□ 2.59
LRRCC1Q9C099 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.23■■■□□ 2.59
LRRCC1Q9C099 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
LRRCC1Q9C099 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
LRRCC1Q9C099 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
LRRCC1Q9C099 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.23■■■□□ 2.59
LRRCC1Q9C099 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.23■■■□□ 2.59
LRRCC1Q9C099 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
LRRCC1Q9C099 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
LRRCC1Q9C099 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
LRRCC1Q9C099 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
LRRCC1Q9C099 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
LRRCC1Q9C099 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC31.22■■■□□ 2.59
LRRCC1Q9C099 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
LRRCC1Q9C099 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
LRRCC1Q9C099 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
LRRCC1Q9C099 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
LRRCC1Q9C099 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
LRRCC1Q9C099 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC31.2■■■□□ 2.59
LRRCC1Q9C099 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
LRRCC1Q9C099 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
LRRCC1Q9C099 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
LRRCC1Q9C099 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms