Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.85■■□□□ 1.57
HIST1H2AJQ99878 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.85■■□□□ 1.57
HIST1H2AJQ99878 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.85■■□□□ 1.57
HIST1H2AJQ99878 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HIST1H2AJQ99878 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
HIST1H2AJQ99878 AP002414.2-202ENST00000590929 1450 ntBASIC24.83■■□□□ 1.57
HIST1H2AJQ99878 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
HIST1H2AJQ99878 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
HIST1H2AJQ99878 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.83■■□□□ 1.57
HIST1H2AJQ99878 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
HIST1H2AJQ99878 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
HIST1H2AJQ99878 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
HIST1H2AJQ99878 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
HIST1H2AJQ99878 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.82■■□□□ 1.56
HIST1H2AJQ99878 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
HIST1H2AJQ99878 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HIST1H2AJQ99878 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HIST1H2AJQ99878 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HIST1H2AJQ99878 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
HIST1H2AJQ99878 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
HIST1H2AJQ99878 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
HIST1H2AJQ99878 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
HIST1H2AJQ99878 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
HIST1H2AJQ99878 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
HIST1H2AJQ99878 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
HIST1H2AJQ99878 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
HIST1H2AJQ99878 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
HIST1H2AJQ99878 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
HIST1H2AJQ99878 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
HIST1H2AJQ99878 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
HIST1H2AJQ99878 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.77■■□□□ 1.56
HIST1H2AJQ99878 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
HIST1H2AJQ99878 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.77■■□□□ 1.56
HIST1H2AJQ99878 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
HIST1H2AJQ99878 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.77■■□□□ 1.56
HIST1H2AJQ99878 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
HIST1H2AJQ99878 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
HIST1H2AJQ99878 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
HIST1H2AJQ99878 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
HIST1H2AJQ99878 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
HIST1H2AJQ99878 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.75■■□□□ 1.55
HIST1H2AJQ99878 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
HIST1H2AJQ99878 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.75■■□□□ 1.55
HIST1H2AJQ99878 BX255925.1-201ENST00000566954 1854 ntBASIC24.75■■□□□ 1.55
HIST1H2AJQ99878 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
HIST1H2AJQ99878 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.74■■□□□ 1.55
HIST1H2AJQ99878 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
HIST1H2AJQ99878 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
HIST1H2AJQ99878 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.73■■□□□ 1.55
HIST1H2AJQ99878 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
HIST1H2AJQ99878 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
HIST1H2AJQ99878 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
HIST1H2AJQ99878 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
HIST1H2AJQ99878 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.72■■□□□ 1.55
HIST1H2AJQ99878 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HIST1H2AJQ99878 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.71■■□□□ 1.55
HIST1H2AJQ99878 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HIST1H2AJQ99878 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
HIST1H2AJQ99878 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HIST1H2AJQ99878 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HIST1H2AJQ99878 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
HIST1H2AJQ99878 LINC01971-201ENST00000617888 1048 ntBASIC24.7■■□□□ 1.54
HIST1H2AJQ99878 AC110285.7-201ENST00000624417 1536 ntBASIC24.7■■□□□ 1.54
HIST1H2AJQ99878 LINC01003-201ENST00000564834 1764 ntBASIC24.7■■□□□ 1.54
HIST1H2AJQ99878 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
HIST1H2AJQ99878 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
HIST1H2AJQ99878 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HIST1H2AJQ99878 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.69■■□□□ 1.54
HIST1H2AJQ99878 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.69■■□□□ 1.54
HIST1H2AJQ99878 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
HIST1H2AJQ99878 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HIST1H2AJQ99878 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HIST1H2AJQ99878 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
HIST1H2AJQ99878 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.67■■□□□ 1.54
HIST1H2AJQ99878 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
HIST1H2AJQ99878 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
HIST1H2AJQ99878 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
HIST1H2AJQ99878 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.66■■□□□ 1.54
HIST1H2AJQ99878 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.65■■□□□ 1.54
HIST1H2AJQ99878 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
HIST1H2AJQ99878 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
HIST1H2AJQ99878 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.64■■□□□ 1.54
HIST1H2AJQ99878 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
HIST1H2AJQ99878 AC018358.1-201ENST00000631079 1402 ntBASIC24.64■■□□□ 1.54
HIST1H2AJQ99878 ZNRF2P2-203ENST00000454624 420 ntBASIC24.64■■□□□ 1.54
HIST1H2AJQ99878 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
HIST1H2AJQ99878 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.64■■□□□ 1.54
HIST1H2AJQ99878 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.64■■□□□ 1.54
HIST1H2AJQ99878 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
HIST1H2AJQ99878 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
HIST1H2AJQ99878 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
HIST1H2AJQ99878 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
HIST1H2AJQ99878 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
HIST1H2AJQ99878 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.63■■□□□ 1.53
HIST1H2AJQ99878 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.63■■□□□ 1.53
HIST1H2AJQ99878 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
HIST1H2AJQ99878 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
HIST1H2AJQ99878 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.62■■□□□ 1.53
HIST1H2AJQ99878 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
HIST1H2AJQ99878 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms