Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 AL033527.3-201ENST00000566366 1196 ntBASIC31.74■■■□□ 2.67
CRAMP1Q96RY5 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
CRAMP1Q96RY5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CRAMP1Q96RY5 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC31.73■■■□□ 2.67
CRAMP1Q96RY5 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.72■■■□□ 2.67
CRAMP1Q96RY5 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
CRAMP1Q96RY5 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
CRAMP1Q96RY5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
CRAMP1Q96RY5 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CRAMP1Q96RY5 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CRAMP1Q96RY5 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.71■■■□□ 2.67
CRAMP1Q96RY5 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC31.7■■■□□ 2.67
CRAMP1Q96RY5 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CRAMP1Q96RY5 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CRAMP1Q96RY5 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
CRAMP1Q96RY5 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CRAMP1Q96RY5 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.68■■■□□ 2.66
CRAMP1Q96RY5 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CRAMP1Q96RY5 ECEL1P2-201ENST00000461596 1295 ntBASIC31.67■■■□□ 2.66
CRAMP1Q96RY5 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CRAMP1Q96RY5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC31.66■■■□□ 2.66
CRAMP1Q96RY5 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
CRAMP1Q96RY5 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CRAMP1Q96RY5 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.65■■■□□ 2.66
CRAMP1Q96RY5 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CRAMP1Q96RY5 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.64■■■□□ 2.66
CRAMP1Q96RY5 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.64■■■□□ 2.65
CRAMP1Q96RY5 KRT18P60-201ENST00000312876 1297 ntBASIC31.63■■■□□ 2.65
CRAMP1Q96RY5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.63■■■□□ 2.65
CRAMP1Q96RY5 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CRAMP1Q96RY5 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC31.61■■■□□ 2.65
CRAMP1Q96RY5 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CRAMP1Q96RY5 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CRAMP1Q96RY5 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
CRAMP1Q96RY5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
CRAMP1Q96RY5 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CRAMP1Q96RY5 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CRAMP1Q96RY5 TSPY13P-201ENST00000338964 914 ntBASIC31.59■■■□□ 2.65
CRAMP1Q96RY5 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.59■■■□□ 2.65
CRAMP1Q96RY5 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CRAMP1Q96RY5 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.59■■■□□ 2.65
CRAMP1Q96RY5 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CRAMP1Q96RY5 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.58■■■□□ 2.65
CRAMP1Q96RY5 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CRAMP1Q96RY5 AC004987.1-201ENST00000428627 508 ntBASIC31.58■■■□□ 2.65
CRAMP1Q96RY5 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.58■■■□□ 2.65
CRAMP1Q96RY5 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.58■■■□□ 2.65
CRAMP1Q96RY5 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CRAMP1Q96RY5 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.57■■■□□ 2.64
CRAMP1Q96RY5 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CRAMP1Q96RY5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.56■■■□□ 2.64
CRAMP1Q96RY5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CRAMP1Q96RY5 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CRAMP1Q96RY5 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CRAMP1Q96RY5 AC126177.7-201ENST00000547904 679 ntBASIC31.56■■■□□ 2.64
CRAMP1Q96RY5 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CRAMP1Q96RY5 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CRAMP1Q96RY5 ATP5G2P3-201ENST00000429083 425 ntBASIC31.55■■■□□ 2.64
CRAMP1Q96RY5 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
CRAMP1Q96RY5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.54■■■□□ 2.64
CRAMP1Q96RY5 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CRAMP1Q96RY5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CRAMP1Q96RY5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CRAMP1Q96RY5 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CRAMP1Q96RY5 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
CRAMP1Q96RY5 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.52■■■□□ 2.64
CRAMP1Q96RY5 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
CRAMP1Q96RY5 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.52■■■□□ 2.64
CRAMP1Q96RY5 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
CRAMP1Q96RY5 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CRAMP1Q96RY5 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.51■■■□□ 2.64
CRAMP1Q96RY5 MOB2-207ENST00000614710 705 ntTSL 5 BASIC31.51■■■□□ 2.63
CRAMP1Q96RY5 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.51■■■□□ 2.63
CRAMP1Q96RY5 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
CRAMP1Q96RY5 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
CRAMP1Q96RY5 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CRAMP1Q96RY5 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CRAMP1Q96RY5 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CRAMP1Q96RY5 AL157400.5-201ENST00000507624 621 ntBASIC31.5■■■□□ 2.63
CRAMP1Q96RY5 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.5■■■□□ 2.63
CRAMP1Q96RY5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CRAMP1Q96RY5 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.49■■■□□ 2.63
CRAMP1Q96RY5 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.49■■■□□ 2.63
CRAMP1Q96RY5 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CRAMP1Q96RY5 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC31.48■■■□□ 2.63
CRAMP1Q96RY5 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CRAMP1Q96RY5 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
CRAMP1Q96RY5 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC31.47■■■□□ 2.63
CRAMP1Q96RY5 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CRAMP1Q96RY5 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.47■■■□□ 2.63
CRAMP1Q96RY5 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.47■■■□□ 2.63
CRAMP1Q96RY5 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
CRAMP1Q96RY5 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
CRAMP1Q96RY5 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CRAMP1Q96RY5 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
CRAMP1Q96RY5 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CRAMP1Q96RY5 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.42■■■□□ 2.62
CRAMP1Q96RY5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.42■■■□□ 2.62
CRAMP1Q96RY5 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CRAMP1Q96RY5 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms