Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.46■■□□□ 1.51
SLC46A1Q96NT5 AL033527.3-201ENST00000566366 1196 ntBASIC24.46■■□□□ 1.51
SLC46A1Q96NT5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.45■■□□□ 1.51
SLC46A1Q96NT5 ST7-AS1-201ENST00000456775 1889 ntBASIC24.45■■□□□ 1.51
SLC46A1Q96NT5 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SLC46A1Q96NT5 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
SLC46A1Q96NT5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
SLC46A1Q96NT5 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SLC46A1Q96NT5 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
SLC46A1Q96NT5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SLC46A1Q96NT5 U85056.1-201ENST00000616429 682 ntBASIC24.44■■□□□ 1.5
SLC46A1Q96NT5 AC018358.1-201ENST00000631079 1402 ntBASIC24.44■■□□□ 1.5
SLC46A1Q96NT5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC46A1Q96NT5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.43■■□□□ 1.5
SLC46A1Q96NT5 AC060814.1-201ENST00000554326 538 ntBASIC24.43■■□□□ 1.5
SLC46A1Q96NT5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
SLC46A1Q96NT5 AC148477.6-201ENST00000623746 465 ntBASIC24.43■■□□□ 1.5
SLC46A1Q96NT5 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC46A1Q96NT5 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC46A1Q96NT5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SLC46A1Q96NT5 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SLC46A1Q96NT5 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
SLC46A1Q96NT5 AC110285.7-201ENST00000624417 1536 ntBASIC24.41■■□□□ 1.5
SLC46A1Q96NT5 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
SLC46A1Q96NT5 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SLC46A1Q96NT5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SLC46A1Q96NT5 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SLC46A1Q96NT5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.4■■□□□ 1.5
SLC46A1Q96NT5 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC46A1Q96NT5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.4■■□□□ 1.5
SLC46A1Q96NT5 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.5
SLC46A1Q96NT5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
SLC46A1Q96NT5 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.39■■□□□ 1.49
SLC46A1Q96NT5 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
SLC46A1Q96NT5 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC46A1Q96NT5 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.37■■□□□ 1.49
SLC46A1Q96NT5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.37■■□□□ 1.49
SLC46A1Q96NT5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SLC46A1Q96NT5 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
SLC46A1Q96NT5 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.34■■□□□ 1.49
SLC46A1Q96NT5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.34■■□□□ 1.49
SLC46A1Q96NT5 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.34■■□□□ 1.49
SLC46A1Q96NT5 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SLC46A1Q96NT5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SLC46A1Q96NT5 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC46A1Q96NT5 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC46A1Q96NT5 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
SLC46A1Q96NT5 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SLC46A1Q96NT5 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC46A1Q96NT5 ABCB10P1-201ENST00000614297 2181 ntBASIC24.33■■□□□ 1.48
SLC46A1Q96NT5 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC46A1Q96NT5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.32■■□□□ 1.48
SLC46A1Q96NT5 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.32■■□□□ 1.48
SLC46A1Q96NT5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.32■■□□□ 1.48
SLC46A1Q96NT5 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
SLC46A1Q96NT5 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
SLC46A1Q96NT5 MIR219A2-201ENST00000608502 1504 ntBASIC24.31■■□□□ 1.48
SLC46A1Q96NT5 TSPY13P-201ENST00000338964 914 ntBASIC24.31■■□□□ 1.48
SLC46A1Q96NT5 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC46A1Q96NT5 AC092296.2-201ENST00000589470 999 ntBASIC24.31■■□□□ 1.48
SLC46A1Q96NT5 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC46A1Q96NT5 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SLC46A1Q96NT5 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC46A1Q96NT5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC46A1Q96NT5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC46A1Q96NT5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC46A1Q96NT5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
SLC46A1Q96NT5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.29■■□□□ 1.48
SLC46A1Q96NT5 KRT18P60-201ENST00000312876 1297 ntBASIC24.29■■□□□ 1.48
SLC46A1Q96NT5 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC46A1Q96NT5 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC46A1Q96NT5 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC46A1Q96NT5 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SLC46A1Q96NT5 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLC46A1Q96NT5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.28■■□□□ 1.48
SLC46A1Q96NT5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
SLC46A1Q96NT5 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SLC46A1Q96NT5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SLC46A1Q96NT5 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SLC46A1Q96NT5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SLC46A1Q96NT5 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SLC46A1Q96NT5 AC004987.1-201ENST00000428627 508 ntBASIC24.27■■□□□ 1.48
SLC46A1Q96NT5 ECEL1P2-201ENST00000461596 1295 ntBASIC24.27■■□□□ 1.48
SLC46A1Q96NT5 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.27■■□□□ 1.48
SLC46A1Q96NT5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SLC46A1Q96NT5 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.27■■□□□ 1.48
SLC46A1Q96NT5 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.26■■□□□ 1.47
SLC46A1Q96NT5 ATP5G2P3-201ENST00000429083 425 ntBASIC24.26■■□□□ 1.47
SLC46A1Q96NT5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SLC46A1Q96NT5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.25■■□□□ 1.47
SLC46A1Q96NT5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.25■■□□□ 1.47
SLC46A1Q96NT5 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.25■■□□□ 1.47
SLC46A1Q96NT5 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SLC46A1Q96NT5 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.25■■□□□ 1.47
SLC46A1Q96NT5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
SLC46A1Q96NT5 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC46A1Q96NT5 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.24■■□□□ 1.47
SLC46A1Q96NT5 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC46A1Q96NT5 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.23■■□□□ 1.47
SLC46A1Q96NT5 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms