Protein–RNA interactions for Protein: Q96N87

SLC6A18, Sodium-dependent neutral amino acid transporter B(0)AT3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A18Q96N87 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
SLC6A18Q96N87 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.37■■□□□ 1.65
SLC6A18Q96N87 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
SLC6A18Q96N87 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
SLC6A18Q96N87 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SLC6A18Q96N87 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SLC6A18Q96N87 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SLC6A18Q96N87 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SLC6A18Q96N87 AC148477.6-201ENST00000623746 465 ntBASIC25.34■■□□□ 1.65
SLC6A18Q96N87 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SLC6A18Q96N87 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.33■■□□□ 1.65
SLC6A18Q96N87 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.33■■□□□ 1.65
SLC6A18Q96N87 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
SLC6A18Q96N87 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SLC6A18Q96N87 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SLC6A18Q96N87 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
SLC6A18Q96N87 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.32■■□□□ 1.64
SLC6A18Q96N87 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SLC6A18Q96N87 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.32■■□□□ 1.64
SLC6A18Q96N87 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SLC6A18Q96N87 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
SLC6A18Q96N87 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.3■■□□□ 1.64
SLC6A18Q96N87 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
SLC6A18Q96N87 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.3■■□□□ 1.64
SLC6A18Q96N87 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
SLC6A18Q96N87 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
SLC6A18Q96N87 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.29■■□□□ 1.64
SLC6A18Q96N87 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.29■■□□□ 1.64
SLC6A18Q96N87 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.29■■□□□ 1.64
SLC6A18Q96N87 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SLC6A18Q96N87 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SLC6A18Q96N87 MIR219A2-201ENST00000608502 1504 ntBASIC25.28■■□□□ 1.64
SLC6A18Q96N87 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SLC6A18Q96N87 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SLC6A18Q96N87 AC060814.1-201ENST00000554326 538 ntBASIC25.28■■□□□ 1.64
SLC6A18Q96N87 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
SLC6A18Q96N87 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
SLC6A18Q96N87 NTF6A-201ENST00000591175 560 ntBASIC25.27■■□□□ 1.64
SLC6A18Q96N87 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SLC6A18Q96N87 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.26■■□□□ 1.63
SLC6A18Q96N87 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
SLC6A18Q96N87 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
SLC6A18Q96N87 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
SLC6A18Q96N87 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SLC6A18Q96N87 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.26■■□□□ 1.63
SLC6A18Q96N87 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SLC6A18Q96N87 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.25■■□□□ 1.63
SLC6A18Q96N87 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SLC6A18Q96N87 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
SLC6A18Q96N87 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SLC6A18Q96N87 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SLC6A18Q96N87 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.25■■□□□ 1.63
SLC6A18Q96N87 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SLC6A18Q96N87 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SLC6A18Q96N87 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SLC6A18Q96N87 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.25■■□□□ 1.63
SLC6A18Q96N87 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SLC6A18Q96N87 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SLC6A18Q96N87 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SLC6A18Q96N87 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
SLC6A18Q96N87 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SLC6A18Q96N87 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SLC6A18Q96N87 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SLC6A18Q96N87 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SLC6A18Q96N87 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.23■■□□□ 1.63
SLC6A18Q96N87 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SLC6A18Q96N87 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SLC6A18Q96N87 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SLC6A18Q96N87 ST7-AS1-201ENST00000456775 1889 ntBASIC25.21■■□□□ 1.63
SLC6A18Q96N87 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.21■■□□□ 1.63
SLC6A18Q96N87 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SLC6A18Q96N87 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SLC6A18Q96N87 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SLC6A18Q96N87 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
SLC6A18Q96N87 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SLC6A18Q96N87 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
SLC6A18Q96N87 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
SLC6A18Q96N87 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SLC6A18Q96N87 AC012354.3-201ENST00000623734 483 ntBASIC25.18■■□□□ 1.62
SLC6A18Q96N87 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.18■■□□□ 1.62
SLC6A18Q96N87 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.17■■□□□ 1.62
SLC6A18Q96N87 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SLC6A18Q96N87 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
SLC6A18Q96N87 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.16■■□□□ 1.62
SLC6A18Q96N87 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.15■■□□□ 1.62
SLC6A18Q96N87 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SLC6A18Q96N87 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.15■■□□□ 1.62
SLC6A18Q96N87 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.15■■□□□ 1.62
SLC6A18Q96N87 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.14■■□□□ 1.62
SLC6A18Q96N87 U85056.1-201ENST00000616429 682 ntBASIC25.14■■□□□ 1.62
SLC6A18Q96N87 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.13■■□□□ 1.61
SLC6A18Q96N87 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SLC6A18Q96N87 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.13■■□□□ 1.61
SLC6A18Q96N87 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SLC6A18Q96N87 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.13■■□□□ 1.61
SLC6A18Q96N87 AC092296.2-201ENST00000589470 999 ntBASIC25.13■■□□□ 1.61
SLC6A18Q96N87 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SLC6A18Q96N87 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SLC6A18Q96N87 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
SLC6A18Q96N87 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms