Protein–RNA interactions for Protein: Q96K19

RNF170, E3 ubiquitin-protein ligase RNF170, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170Q96K19 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.16
RNF170Q96K19 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF170Q96K19 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF170Q96K19 AC005559.1-201ENST00000589661 871 ntBASIC22.32■■□□□ 1.16
RNF170Q96K19 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF170Q96K19 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF170Q96K19 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
RNF170Q96K19 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF170Q96K19 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF170Q96K19 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.31■■□□□ 1.16
RNF170Q96K19 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.31■■□□□ 1.16
RNF170Q96K19 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
RNF170Q96K19 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.31■■□□□ 1.16
RNF170Q96K19 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF170Q96K19 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF170Q96K19 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.3■■□□□ 1.16
RNF170Q96K19 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RNF170Q96K19 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF170Q96K19 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF170Q96K19 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.29■■□□□ 1.16
RNF170Q96K19 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF170Q96K19 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
RNF170Q96K19 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.29■■□□□ 1.16
RNF170Q96K19 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF170Q96K19 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
RNF170Q96K19 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.27■■□□□ 1.16
RNF170Q96K19 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RNF170Q96K19 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RNF170Q96K19 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.27■■□□□ 1.16
RNF170Q96K19 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
RNF170Q96K19 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.25■■□□□ 1.15
RNF170Q96K19 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RNF170Q96K19 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF170Q96K19 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF170Q96K19 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.24■■□□□ 1.15
RNF170Q96K19 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.23■■□□□ 1.15
RNF170Q96K19 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.23■■□□□ 1.15
RNF170Q96K19 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF170Q96K19 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.23■■□□□ 1.15
RNF170Q96K19 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
RNF170Q96K19 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF170Q96K19 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF170Q96K19 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.22■■□□□ 1.15
RNF170Q96K19 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF170Q96K19 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.22■■□□□ 1.15
RNF170Q96K19 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RNF170Q96K19 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.21■■□□□ 1.15
RNF170Q96K19 AC093323.1-202ENST00000635031 2045 ntBASIC22.21■■□□□ 1.15
RNF170Q96K19 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF170Q96K19 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF170Q96K19 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF170Q96K19 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.21■■□□□ 1.15
RNF170Q96K19 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF170Q96K19 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF170Q96K19 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF170Q96K19 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.2■■□□□ 1.14
RNF170Q96K19 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
RNF170Q96K19 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.2■■□□□ 1.14
RNF170Q96K19 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RNF170Q96K19 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.19■■□□□ 1.14
RNF170Q96K19 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
RNF170Q96K19 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF170Q96K19 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.19■■□□□ 1.14
RNF170Q96K19 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.19■■□□□ 1.14
RNF170Q96K19 MIR3665-201ENST00000578708 105 ntBASIC22.19■■□□□ 1.14
RNF170Q96K19 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.19■■□□□ 1.14
RNF170Q96K19 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.19■■□□□ 1.14
RNF170Q96K19 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF170Q96K19 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF170Q96K19 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.18■■□□□ 1.14
RNF170Q96K19 DUX4L28-201ENST00000623687 678 ntBASIC22.18■■□□□ 1.14
RNF170Q96K19 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF170Q96K19 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF170Q96K19 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF170Q96K19 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF170Q96K19 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF170Q96K19 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF170Q96K19 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
RNF170Q96K19 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.16■■□□□ 1.14
RNF170Q96K19 AP006261.1-201ENST00000584783 668 ntBASIC22.16■■□□□ 1.14
RNF170Q96K19 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF170Q96K19 AC127502.1-201ENST00000399971 1502 ntBASIC22.16■■□□□ 1.14
RNF170Q96K19 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF170Q96K19 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF170Q96K19 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.15■■□□□ 1.14
RNF170Q96K19 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF170Q96K19 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF170Q96K19 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.15■■□□□ 1.14
RNF170Q96K19 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF170Q96K19 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF170Q96K19 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.14■■□□□ 1.14
RNF170Q96K19 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.14■■□□□ 1.13
RNF170Q96K19 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.13■■□□□ 1.13
RNF170Q96K19 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.13■■□□□ 1.13
RNF170Q96K19 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF170Q96K19 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF170Q96K19 AC108673.1-201ENST00000510422 1159 ntBASIC22.12■■□□□ 1.13
RNF170Q96K19 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF170Q96K19 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.11■■□□□ 1.13
RNF170Q96K19 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms