Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
TMEM40Q8WWA1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.04■■■□□ 2.08
TMEM40Q8WWA1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.04■■■□□ 2.08
TMEM40Q8WWA1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.04■■■□□ 2.08
TMEM40Q8WWA1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.04■■■□□ 2.08
TMEM40Q8WWA1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.03■■■□□ 2.08
TMEM40Q8WWA1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.03■■■□□ 2.08
TMEM40Q8WWA1 AC148477.6-201ENST00000623746 465 ntBASIC28.03■■■□□ 2.08
TMEM40Q8WWA1 AC022413.1-201ENST00000624602 984 ntBASIC28.03■■■□□ 2.08
TMEM40Q8WWA1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
TMEM40Q8WWA1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
TMEM40Q8WWA1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
TMEM40Q8WWA1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
TMEM40Q8WWA1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
TMEM40Q8WWA1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.01■■■□□ 2.07
TMEM40Q8WWA1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
TMEM40Q8WWA1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
TMEM40Q8WWA1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
TMEM40Q8WWA1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.01■■■□□ 2.07
TMEM40Q8WWA1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.01■■■□□ 2.07
TMEM40Q8WWA1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28■■■□□ 2.07
TMEM40Q8WWA1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28■■■□□ 2.07
TMEM40Q8WWA1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28■■■□□ 2.07
TMEM40Q8WWA1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28■■■□□ 2.07
TMEM40Q8WWA1 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
TMEM40Q8WWA1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
TMEM40Q8WWA1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
TMEM40Q8WWA1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
TMEM40Q8WWA1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
TMEM40Q8WWA1 ABHD17AP5-201ENST00000580133 923 ntBASIC27.98■■■□□ 2.07
TMEM40Q8WWA1 MIR219A2-201ENST00000608502 1504 ntBASIC27.97■■■□□ 2.07
TMEM40Q8WWA1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
TMEM40Q8WWA1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.97■■■□□ 2.07
TMEM40Q8WWA1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
TMEM40Q8WWA1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC27.97■■■□□ 2.07
TMEM40Q8WWA1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
TMEM40Q8WWA1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
TMEM40Q8WWA1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
TMEM40Q8WWA1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
TMEM40Q8WWA1 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
TMEM40Q8WWA1 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.06
TMEM40Q8WWA1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
TMEM40Q8WWA1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
TMEM40Q8WWA1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC27.94■■■□□ 2.06
TMEM40Q8WWA1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
TMEM40Q8WWA1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
TMEM40Q8WWA1 AC100797.4-201ENST00000631653 1827 ntBASIC27.93■■■□□ 2.06
TMEM40Q8WWA1 AP004833.2-201ENST00000532228 1454 ntBASIC27.93■■■□□ 2.06
TMEM40Q8WWA1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC27.92■■■□□ 2.06
TMEM40Q8WWA1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
TMEM40Q8WWA1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
TMEM40Q8WWA1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
TMEM40Q8WWA1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC27.91■■■□□ 2.06
TMEM40Q8WWA1 AC060814.1-201ENST00000554326 538 ntBASIC27.91■■■□□ 2.06
TMEM40Q8WWA1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
TMEM40Q8WWA1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
TMEM40Q8WWA1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
TMEM40Q8WWA1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
TMEM40Q8WWA1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC27.89■■■□□ 2.06
TMEM40Q8WWA1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
TMEM40Q8WWA1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.88■■■□□ 2.05
TMEM40Q8WWA1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC27.88■■■□□ 2.05
TMEM40Q8WWA1 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.88■■■□□ 2.05
TMEM40Q8WWA1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
TMEM40Q8WWA1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
TMEM40Q8WWA1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
TMEM40Q8WWA1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.85■■■□□ 2.05
TMEM40Q8WWA1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.84■■■□□ 2.05
TMEM40Q8WWA1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.84■■■□□ 2.05
TMEM40Q8WWA1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
TMEM40Q8WWA1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
TMEM40Q8WWA1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC27.83■■■□□ 2.05
TMEM40Q8WWA1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
TMEM40Q8WWA1 AL139393.2-201ENST00000608721 2025 ntBASIC27.83■■■□□ 2.05
TMEM40Q8WWA1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
TMEM40Q8WWA1 MED25-210ENST00000612854 801 ntTSL 5 BASIC27.81■■■□□ 2.04
TMEM40Q8WWA1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
TMEM40Q8WWA1 MED25-214ENST00000622402 642 ntTSL 5 BASIC27.81■■■□□ 2.04
TMEM40Q8WWA1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
TMEM40Q8WWA1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.8■■■□□ 2.04
TMEM40Q8WWA1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC27.8■■■□□ 2.04
TMEM40Q8WWA1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC27.8■■■□□ 2.04
TMEM40Q8WWA1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC27.8■■■□□ 2.04
TMEM40Q8WWA1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC27.79■■■□□ 2.04
TMEM40Q8WWA1 ABCB10P1-201ENST00000614297 2181 ntBASIC27.79■■■□□ 2.04
TMEM40Q8WWA1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TMEM40Q8WWA1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
TMEM40Q8WWA1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
TMEM40Q8WWA1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.77■■■□□ 2.04
TMEM40Q8WWA1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.77■■■□□ 2.04
TMEM40Q8WWA1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
TMEM40Q8WWA1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
TMEM40Q8WWA1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC27.76■■■□□ 2.03
TMEM40Q8WWA1 AC092296.2-201ENST00000589470 999 ntBASIC27.76■■■□□ 2.03
TMEM40Q8WWA1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
TMEM40Q8WWA1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
TMEM40Q8WWA1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC27.75■■■□□ 2.03
TMEM40Q8WWA1 NTF6A-201ENST00000591175 560 ntBASIC27.75■■■□□ 2.03
TMEM40Q8WWA1 ABCB10P3-201ENST00000561950 2166 ntBASIC27.75■■■□□ 2.03
TMEM40Q8WWA1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.74■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms