Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
TMEM40Q8WWA1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.04■■■□□ 2.08
TMEM40Q8WWA1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.04■■■□□ 2.08
TMEM40Q8WWA1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.04■■■□□ 2.08
TMEM40Q8WWA1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.04■■■□□ 2.08
TMEM40Q8WWA1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.03■■■□□ 2.08
TMEM40Q8WWA1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.03■■■□□ 2.08
TMEM40Q8WWA1 AC148477.6-201ENST00000623746 465 ntBASIC28.03■■■□□ 2.08
TMEM40Q8WWA1 AC022413.1-201ENST00000624602 984 ntBASIC28.03■■■□□ 2.08
TMEM40Q8WWA1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
TMEM40Q8WWA1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
TMEM40Q8WWA1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
TMEM40Q8WWA1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
TMEM40Q8WWA1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
TMEM40Q8WWA1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.01■■■□□ 2.07
TMEM40Q8WWA1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
TMEM40Q8WWA1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
TMEM40Q8WWA1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
TMEM40Q8WWA1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.01■■■□□ 2.07
TMEM40Q8WWA1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.01■■■□□ 2.07
TMEM40Q8WWA1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28■■■□□ 2.07
TMEM40Q8WWA1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28■■■□□ 2.07
TMEM40Q8WWA1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28■■■□□ 2.07
TMEM40Q8WWA1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28■■■□□ 2.07
TMEM40Q8WWA1 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
TMEM40Q8WWA1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
TMEM40Q8WWA1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
TMEM40Q8WWA1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
TMEM40Q8WWA1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
TMEM40Q8WWA1 ABHD17AP5-201ENST00000580133 923 ntBASIC27.98■■■□□ 2.07
TMEM40Q8WWA1 MIR219A2-201ENST00000608502 1504 ntBASIC27.97■■■□□ 2.07
TMEM40Q8WWA1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
TMEM40Q8WWA1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.97■■■□□ 2.07
TMEM40Q8WWA1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
TMEM40Q8WWA1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC27.97■■■□□ 2.07
TMEM40Q8WWA1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
TMEM40Q8WWA1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
TMEM40Q8WWA1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
TMEM40Q8WWA1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
TMEM40Q8WWA1 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
TMEM40Q8WWA1 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.06
TMEM40Q8WWA1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
TMEM40Q8WWA1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
TMEM40Q8WWA1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC27.94■■■□□ 2.06
TMEM40Q8WWA1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
TMEM40Q8WWA1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
TMEM40Q8WWA1 AC100797.4-201ENST00000631653 1827 ntBASIC27.93■■■□□ 2.06
TMEM40Q8WWA1 AP004833.2-201ENST00000532228 1454 ntBASIC27.93■■■□□ 2.06
TMEM40Q8WWA1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC27.92■■■□□ 2.06
TMEM40Q8WWA1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
TMEM40Q8WWA1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
TMEM40Q8WWA1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
TMEM40Q8WWA1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC27.91■■■□□ 2.06
TMEM40Q8WWA1 AC060814.1-201ENST00000554326 538 ntBASIC27.91■■■□□ 2.06
TMEM40Q8WWA1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
TMEM40Q8WWA1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
TMEM40Q8WWA1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
TMEM40Q8WWA1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
TMEM40Q8WWA1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC27.89■■■□□ 2.06
TMEM40Q8WWA1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
TMEM40Q8WWA1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.88■■■□□ 2.05
TMEM40Q8WWA1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC27.88■■■□□ 2.05
TMEM40Q8WWA1 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.88■■■□□ 2.05
TMEM40Q8WWA1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
TMEM40Q8WWA1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
TMEM40Q8WWA1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
TMEM40Q8WWA1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.85■■■□□ 2.05
TMEM40Q8WWA1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.84■■■□□ 2.05
TMEM40Q8WWA1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.84■■■□□ 2.05
TMEM40Q8WWA1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
TMEM40Q8WWA1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
TMEM40Q8WWA1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC27.83■■■□□ 2.05
TMEM40Q8WWA1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
TMEM40Q8WWA1 AL139393.2-201ENST00000608721 2025 ntBASIC27.83■■■□□ 2.05
TMEM40Q8WWA1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
TMEM40Q8WWA1 MED25-210ENST00000612854 801 ntTSL 5 BASIC27.81■■■□□ 2.04
TMEM40Q8WWA1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
TMEM40Q8WWA1 MED25-214ENST00000622402 642 ntTSL 5 BASIC27.81■■■□□ 2.04
TMEM40Q8WWA1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
TMEM40Q8WWA1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.8■■■□□ 2.04
TMEM40Q8WWA1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC27.8■■■□□ 2.04
TMEM40Q8WWA1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC27.8■■■□□ 2.04
TMEM40Q8WWA1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC27.8■■■□□ 2.04
TMEM40Q8WWA1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC27.79■■■□□ 2.04
TMEM40Q8WWA1 ABCB10P1-201ENST00000614297 2181 ntBASIC27.79■■■□□ 2.04
TMEM40Q8WWA1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TMEM40Q8WWA1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
TMEM40Q8WWA1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
TMEM40Q8WWA1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.77■■■□□ 2.04
TMEM40Q8WWA1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.77■■■□□ 2.04
TMEM40Q8WWA1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
TMEM40Q8WWA1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
TMEM40Q8WWA1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC27.76■■■□□ 2.03
TMEM40Q8WWA1 AC092296.2-201ENST00000589470 999 ntBASIC27.76■■■□□ 2.03
TMEM40Q8WWA1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
TMEM40Q8WWA1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
TMEM40Q8WWA1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC27.75■■■□□ 2.03
TMEM40Q8WWA1 NTF6A-201ENST00000591175 560 ntBASIC27.75■■■□□ 2.03
TMEM40Q8WWA1 ABCB10P3-201ENST00000561950 2166 ntBASIC27.75■■■□□ 2.03
TMEM40Q8WWA1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.74■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms