Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 MIR4449-201ENST00000578365 66 ntBASIC30.23■■■□□ 2.43
STAG1Q8WVM7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
STAG1Q8WVM7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.22■■■□□ 2.43
STAG1Q8WVM7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
STAG1Q8WVM7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.22■■■□□ 2.43
STAG1Q8WVM7 AC110285.7-201ENST00000624417 1536 ntBASIC30.21■■■□□ 2.43
STAG1Q8WVM7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.2■■■□□ 2.43
STAG1Q8WVM7 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.2■■■□□ 2.43
STAG1Q8WVM7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.2■■■□□ 2.42
STAG1Q8WVM7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.19■■■□□ 2.42
STAG1Q8WVM7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
STAG1Q8WVM7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
STAG1Q8WVM7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
STAG1Q8WVM7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
STAG1Q8WVM7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.18■■■□□ 2.42
STAG1Q8WVM7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
STAG1Q8WVM7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
STAG1Q8WVM7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
STAG1Q8WVM7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
STAG1Q8WVM7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
STAG1Q8WVM7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
STAG1Q8WVM7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
STAG1Q8WVM7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
STAG1Q8WVM7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
STAG1Q8WVM7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.14■■■□□ 2.42
STAG1Q8WVM7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.14■■■□□ 2.42
STAG1Q8WVM7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.42
STAG1Q8WVM7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
STAG1Q8WVM7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
STAG1Q8WVM7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.13■■■□□ 2.41
STAG1Q8WVM7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
STAG1Q8WVM7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
STAG1Q8WVM7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
STAG1Q8WVM7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
STAG1Q8WVM7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
STAG1Q8WVM7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.11■■■□□ 2.41
STAG1Q8WVM7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
STAG1Q8WVM7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
STAG1Q8WVM7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
STAG1Q8WVM7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
STAG1Q8WVM7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
STAG1Q8WVM7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.1■■■□□ 2.41
STAG1Q8WVM7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
STAG1Q8WVM7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.09■■■□□ 2.41
STAG1Q8WVM7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
STAG1Q8WVM7 DRD5P2-201ENST00000421395 2012 ntBASIC30.08■■■□□ 2.41
STAG1Q8WVM7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.08■■■□□ 2.41
STAG1Q8WVM7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.07■■■□□ 2.41
STAG1Q8WVM7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
STAG1Q8WVM7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.07■■■□□ 2.4
STAG1Q8WVM7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
STAG1Q8WVM7 AP002414.2-202ENST00000590929 1450 ntBASIC30.06■■■□□ 2.4
STAG1Q8WVM7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
STAG1Q8WVM7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
STAG1Q8WVM7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
STAG1Q8WVM7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
STAG1Q8WVM7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
STAG1Q8WVM7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
STAG1Q8WVM7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
STAG1Q8WVM7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.04■■■□□ 2.4
STAG1Q8WVM7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
STAG1Q8WVM7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
STAG1Q8WVM7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
STAG1Q8WVM7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.03■■■□□ 2.4
STAG1Q8WVM7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
STAG1Q8WVM7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.02■■■□□ 2.4
STAG1Q8WVM7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
STAG1Q8WVM7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
STAG1Q8WVM7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30■■■□□ 2.39
STAG1Q8WVM7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
STAG1Q8WVM7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
STAG1Q8WVM7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
STAG1Q8WVM7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30■■■□□ 2.39
STAG1Q8WVM7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
STAG1Q8WVM7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
STAG1Q8WVM7 AC008813.1-201ENST00000536597 885 ntBASIC29.99■■■□□ 2.39
STAG1Q8WVM7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
STAG1Q8WVM7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
STAG1Q8WVM7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
STAG1Q8WVM7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.98■■■□□ 2.39
STAG1Q8WVM7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
STAG1Q8WVM7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
STAG1Q8WVM7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC29.98■■■□□ 2.39
STAG1Q8WVM7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
STAG1Q8WVM7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC29.97■■■□□ 2.39
STAG1Q8WVM7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
STAG1Q8WVM7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
STAG1Q8WVM7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.96■■■□□ 2.39
STAG1Q8WVM7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
STAG1Q8WVM7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
STAG1Q8WVM7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
STAG1Q8WVM7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC29.95■■■□□ 2.39
STAG1Q8WVM7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
STAG1Q8WVM7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
STAG1Q8WVM7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
STAG1Q8WVM7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.94■■■□□ 2.38
STAG1Q8WVM7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
STAG1Q8WVM7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
STAG1Q8WVM7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
STAG1Q8WVM7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29.93■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms