Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF138Q8WVD3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.3■■□□□ 1.32
RNF138Q8WVD3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF138Q8WVD3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.29■■□□□ 1.32
RNF138Q8WVD3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.29■■□□□ 1.32
RNF138Q8WVD3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RNF138Q8WVD3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RNF138Q8WVD3 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.28■■□□□ 1.32
RNF138Q8WVD3 AP002414.2-202ENST00000590929 1450 ntBASIC23.28■■□□□ 1.32
RNF138Q8WVD3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF138Q8WVD3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RNF138Q8WVD3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RNF138Q8WVD3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF138Q8WVD3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RNF138Q8WVD3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.27■■□□□ 1.32
RNF138Q8WVD3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF138Q8WVD3 AC016575.1-201ENST00000607026 382 ntBASIC23.26■■□□□ 1.31
RNF138Q8WVD3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF138Q8WVD3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF138Q8WVD3 DRD5P2-201ENST00000421395 2012 ntBASIC23.25■■□□□ 1.31
RNF138Q8WVD3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF138Q8WVD3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.24■■□□□ 1.31
RNF138Q8WVD3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.24■■□□□ 1.31
RNF138Q8WVD3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RNF138Q8WVD3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF138Q8WVD3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RNF138Q8WVD3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.23■■□□□ 1.31
RNF138Q8WVD3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.23■■□□□ 1.31
RNF138Q8WVD3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF138Q8WVD3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF138Q8WVD3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
RNF138Q8WVD3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RNF138Q8WVD3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.22■■□□□ 1.31
RNF138Q8WVD3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
RNF138Q8WVD3 MIR639-201ENST00000384974 98 ntBASIC23.21■■□□□ 1.31
RNF138Q8WVD3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RNF138Q8WVD3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RNF138Q8WVD3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.21■■□□□ 1.31
RNF138Q8WVD3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF138Q8WVD3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF138Q8WVD3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
RNF138Q8WVD3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RNF138Q8WVD3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.2■■□□□ 1.3
RNF138Q8WVD3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
RNF138Q8WVD3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RNF138Q8WVD3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.2■■□□□ 1.3
RNF138Q8WVD3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.2■■□□□ 1.3
RNF138Q8WVD3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF138Q8WVD3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF138Q8WVD3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.19■■□□□ 1.3
RNF138Q8WVD3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.19■■□□□ 1.3
RNF138Q8WVD3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
RNF138Q8WVD3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF138Q8WVD3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF138Q8WVD3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
RNF138Q8WVD3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF138Q8WVD3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF138Q8WVD3 AC008813.1-201ENST00000536597 885 ntBASIC23.17■■□□□ 1.3
RNF138Q8WVD3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF138Q8WVD3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RNF138Q8WVD3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
RNF138Q8WVD3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RNF138Q8WVD3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF138Q8WVD3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF138Q8WVD3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
RNF138Q8WVD3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
RNF138Q8WVD3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RNF138Q8WVD3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RNF138Q8WVD3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RNF138Q8WVD3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RNF138Q8WVD3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.14■■□□□ 1.29
RNF138Q8WVD3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
RNF138Q8WVD3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RNF138Q8WVD3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
RNF138Q8WVD3 AC018358.1-201ENST00000631079 1402 ntBASIC23.13■■□□□ 1.29
RNF138Q8WVD3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RNF138Q8WVD3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF138Q8WVD3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
RNF138Q8WVD3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.12■■□□□ 1.29
RNF138Q8WVD3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.12■■□□□ 1.29
RNF138Q8WVD3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.12■■□□□ 1.29
RNF138Q8WVD3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF138Q8WVD3 HLA-V-202ENST00000446817 847 ntBASIC23.11■■□□□ 1.29
RNF138Q8WVD3 AC148477.6-201ENST00000623746 465 ntBASIC23.11■■□□□ 1.29
RNF138Q8WVD3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
RNF138Q8WVD3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
RNF138Q8WVD3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
RNF138Q8WVD3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
RNF138Q8WVD3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF138Q8WVD3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RNF138Q8WVD3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF138Q8WVD3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF138Q8WVD3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF138Q8WVD3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.09■■□□□ 1.29
RNF138Q8WVD3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
RNF138Q8WVD3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.08■■□□□ 1.29
RNF138Q8WVD3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
RNF138Q8WVD3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
RNF138Q8WVD3 MIR4449-201ENST00000578365 66 ntBASIC23.08■■□□□ 1.29
RNF138Q8WVD3 AC142086.6-201ENST00000621154 1765 ntBASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms