Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SNED1Q8TER0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SNED1Q8TER0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
SNED1Q8TER0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
SNED1Q8TER0 TSPY13P-201ENST00000338964 914 ntBASIC31.56■■■□□ 2.64
SNED1Q8TER0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.56■■■□□ 2.64
SNED1Q8TER0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.55■■■□□ 2.64
SNED1Q8TER0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SNED1Q8TER0 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SNED1Q8TER0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC31.54■■■□□ 2.64
SNED1Q8TER0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SNED1Q8TER0 ATP5G2P3-201ENST00000429083 425 ntBASIC31.53■■■□□ 2.64
SNED1Q8TER0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC31.53■■■□□ 2.64
SNED1Q8TER0 AL157400.5-201ENST00000507624 621 ntBASIC31.53■■■□□ 2.64
SNED1Q8TER0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SNED1Q8TER0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SNED1Q8TER0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SNED1Q8TER0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SNED1Q8TER0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.52■■■□□ 2.64
SNED1Q8TER0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
SNED1Q8TER0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SNED1Q8TER0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.64
SNED1Q8TER0 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.51■■■□□ 2.64
SNED1Q8TER0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
SNED1Q8TER0 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.51■■■□□ 2.64
SNED1Q8TER0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
SNED1Q8TER0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SNED1Q8TER0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
SNED1Q8TER0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
SNED1Q8TER0 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SNED1Q8TER0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
SNED1Q8TER0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC31.49■■■□□ 2.63
SNED1Q8TER0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SNED1Q8TER0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SNED1Q8TER0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
SNED1Q8TER0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SNED1Q8TER0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.49■■■□□ 2.63
SNED1Q8TER0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.49■■■□□ 2.63
SNED1Q8TER0 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SNED1Q8TER0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SNED1Q8TER0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.48■■■□□ 2.63
SNED1Q8TER0 RARRES2P1-201ENST00000474487 481 ntBASIC31.48■■■□□ 2.63
SNED1Q8TER0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SNED1Q8TER0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
SNED1Q8TER0 ECEL1P2-201ENST00000461596 1295 ntBASIC31.47■■■□□ 2.63
SNED1Q8TER0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
SNED1Q8TER0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SNED1Q8TER0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC31.45■■■□□ 2.63
SNED1Q8TER0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SNED1Q8TER0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
SNED1Q8TER0 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
SNED1Q8TER0 AL135925.1-201ENST00000605920 1701 ntBASIC31.45■■■□□ 2.62
SNED1Q8TER0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC31.44■■■□□ 2.62
SNED1Q8TER0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.44■■■□□ 2.62
SNED1Q8TER0 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
SNED1Q8TER0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SNED1Q8TER0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SNED1Q8TER0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SNED1Q8TER0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
SNED1Q8TER0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC31.41■■■□□ 2.62
SNED1Q8TER0 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.4■■■□□ 2.62
SNED1Q8TER0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
SNED1Q8TER0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SNED1Q8TER0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
SNED1Q8TER0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SNED1Q8TER0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
SNED1Q8TER0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
SNED1Q8TER0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.37■■■□□ 2.61
SNED1Q8TER0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SNED1Q8TER0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC31.36■■■□□ 2.61
SNED1Q8TER0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SNED1Q8TER0 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SNED1Q8TER0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.34■■■□□ 2.61
SNED1Q8TER0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SNED1Q8TER0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.33■■■□□ 2.61
SNED1Q8TER0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
SNED1Q8TER0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SNED1Q8TER0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
SNED1Q8TER0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.33■■■□□ 2.61
SNED1Q8TER0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
SNED1Q8TER0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.32■■■□□ 2.6
SNED1Q8TER0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SNED1Q8TER0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SNED1Q8TER0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
SNED1Q8TER0 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.3■■■□□ 2.6
SNED1Q8TER0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SNED1Q8TER0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC31.3■■■□□ 2.6
SNED1Q8TER0 AC007029.1-201ENST00000604183 313 ntBASIC31.3■■■□□ 2.6
SNED1Q8TER0 AC129492.7-201ENST00000622992 756 ntBASIC31.3■■■□□ 2.6
SNED1Q8TER0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.29■■■□□ 2.6
SNED1Q8TER0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SNED1Q8TER0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SNED1Q8TER0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SNED1Q8TER0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SNED1Q8TER0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SNED1Q8TER0 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SNED1Q8TER0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SNED1Q8TER0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
SNED1Q8TER0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SNED1Q8TER0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms