Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMIM11BQ8TCY0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC16.46■□□□□ 0.23
SMIM11BQ8TCY0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM11BQ8TCY0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM11BQ8TCY0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM11BQ8TCY0 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM11BQ8TCY0 AP004833.2-201ENST00000532228 1454 ntBASIC16.45■□□□□ 0.22
SMIM11BQ8TCY0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM11BQ8TCY0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC16.45■□□□□ 0.22
SMIM11BQ8TCY0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC16.45■□□□□ 0.22
SMIM11BQ8TCY0 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM11BQ8TCY0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11BQ8TCY0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11BQ8TCY0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11BQ8TCY0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SMIM11BQ8TCY0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11BQ8TCY0 AC145676.1-201ENST00000514988 2004 ntBASIC16.44■□□□□ 0.22
SMIM11BQ8TCY0 AC093323.1-202ENST00000635031 2045 ntBASIC16.44■□□□□ 0.22
SMIM11BQ8TCY0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
SMIM11BQ8TCY0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM11BQ8TCY0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SMIM11BQ8TCY0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM11BQ8TCY0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC16.43■□□□□ 0.22
SMIM11BQ8TCY0 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC16.43■□□□□ 0.22
SMIM11BQ8TCY0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM11BQ8TCY0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM11BQ8TCY0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM11BQ8TCY0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM11BQ8TCY0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM11BQ8TCY0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM11BQ8TCY0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM11BQ8TCY0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM11BQ8TCY0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM11BQ8TCY0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM11BQ8TCY0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM11BQ8TCY0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM11BQ8TCY0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM11BQ8TCY0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
SMIM11BQ8TCY0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.41■□□□□ 0.22
SMIM11BQ8TCY0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMIM11BQ8TCY0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM11BQ8TCY0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM11BQ8TCY0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM11BQ8TCY0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMIM11BQ8TCY0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM11BQ8TCY0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SMIM11BQ8TCY0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC16.39■□□□□ 0.21
SMIM11BQ8TCY0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMIM11BQ8TCY0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC16.39■□□□□ 0.21
SMIM11BQ8TCY0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SMIM11BQ8TCY0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.38■□□□□ 0.21
SMIM11BQ8TCY0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
SMIM11BQ8TCY0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SMIM11BQ8TCY0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM11BQ8TCY0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11BQ8TCY0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11BQ8TCY0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.37■□□□□ 0.21
SMIM11BQ8TCY0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11BQ8TCY0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11BQ8TCY0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SMIM11BQ8TCY0 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM11BQ8TCY0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.37■□□□□ 0.21
SMIM11BQ8TCY0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SMIM11BQ8TCY0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMIM11BQ8TCY0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMIM11BQ8TCY0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMIM11BQ8TCY0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
SMIM11BQ8TCY0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMIM11BQ8TCY0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC16.36■□□□□ 0.21
SMIM11BQ8TCY0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMIM11BQ8TCY0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC16.35■□□□□ 0.21
SMIM11BQ8TCY0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SMIM11BQ8TCY0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC16.35■□□□□ 0.21
SMIM11BQ8TCY0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM11BQ8TCY0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM11BQ8TCY0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM11BQ8TCY0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SMIM11BQ8TCY0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC16.34■□□□□ 0.21
SMIM11BQ8TCY0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM11BQ8TCY0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM11BQ8TCY0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SMIM11BQ8TCY0 WASH5P-204ENST00000632292 975 ntBASIC16.33■□□□□ 0.2
SMIM11BQ8TCY0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SMIM11BQ8TCY0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMIM11BQ8TCY0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC16.33■□□□□ 0.2
SMIM11BQ8TCY0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SMIM11BQ8TCY0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SMIM11BQ8TCY0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC16.32■□□□□ 0.2
SMIM11BQ8TCY0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SMIM11BQ8TCY0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM11BQ8TCY0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM11BQ8TCY0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM11BQ8TCY0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM11BQ8TCY0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM11BQ8TCY0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM11BQ8TCY0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM11BQ8TCY0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM11BQ8TCY0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.31■□□□□ 0.2
SMIM11BQ8TCY0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM11BQ8TCY0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms