Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
TTC9BQ8N6N2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TTC9BQ8N6N2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
TTC9BQ8N6N2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.97■■□□□ 1.91
TTC9BQ8N6N2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
TTC9BQ8N6N2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
TTC9BQ8N6N2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
TTC9BQ8N6N2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.95■■□□□ 1.91
TTC9BQ8N6N2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TTC9BQ8N6N2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
TTC9BQ8N6N2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.95■■□□□ 1.9
TTC9BQ8N6N2 AC100797.4-201ENST00000631653 1827 ntBASIC26.95■■□□□ 1.9
TTC9BQ8N6N2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
TTC9BQ8N6N2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TTC9BQ8N6N2 GPX1-201ENST00000419349 1106 ntBASIC26.94■■□□□ 1.9
TTC9BQ8N6N2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.94■■□□□ 1.9
TTC9BQ8N6N2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
TTC9BQ8N6N2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TTC9BQ8N6N2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
TTC9BQ8N6N2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TTC9BQ8N6N2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
TTC9BQ8N6N2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.92■■□□□ 1.9
TTC9BQ8N6N2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TTC9BQ8N6N2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.92■■□□□ 1.9
TTC9BQ8N6N2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.91■■□□□ 1.9
TTC9BQ8N6N2 AL139393.2-201ENST00000608721 2025 ntBASIC26.91■■□□□ 1.9
TTC9BQ8N6N2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.91■■□□□ 1.9
TTC9BQ8N6N2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
TTC9BQ8N6N2 AP004833.2-201ENST00000532228 1454 ntBASIC26.91■■□□□ 1.9
TTC9BQ8N6N2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
TTC9BQ8N6N2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TTC9BQ8N6N2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TTC9BQ8N6N2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.9■■□□□ 1.9
TTC9BQ8N6N2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.9■■□□□ 1.9
TTC9BQ8N6N2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TTC9BQ8N6N2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.89■■□□□ 1.89
TTC9BQ8N6N2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.88■■□□□ 1.89
TTC9BQ8N6N2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
TTC9BQ8N6N2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
TTC9BQ8N6N2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.88■■□□□ 1.89
TTC9BQ8N6N2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.88■■□□□ 1.89
TTC9BQ8N6N2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.87■■□□□ 1.89
TTC9BQ8N6N2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
TTC9BQ8N6N2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TTC9BQ8N6N2 RARRES2P2-201ENST00000394842 485 ntBASIC26.87■■□□□ 1.89
TTC9BQ8N6N2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
TTC9BQ8N6N2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.87■■□□□ 1.89
TTC9BQ8N6N2 AC148477.6-201ENST00000623746 465 ntBASIC26.87■■□□□ 1.89
TTC9BQ8N6N2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
TTC9BQ8N6N2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.86■■□□□ 1.89
TTC9BQ8N6N2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.86■■□□□ 1.89
TTC9BQ8N6N2 MIR219A2-201ENST00000608502 1504 ntBASIC26.85■■□□□ 1.89
TTC9BQ8N6N2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
TTC9BQ8N6N2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TTC9BQ8N6N2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.85■■□□□ 1.89
TTC9BQ8N6N2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TTC9BQ8N6N2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.85■■□□□ 1.89
TTC9BQ8N6N2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TTC9BQ8N6N2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.84■■□□□ 1.89
TTC9BQ8N6N2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TTC9BQ8N6N2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.84■■□□□ 1.89
TTC9BQ8N6N2 AC022413.1-201ENST00000624602 984 ntBASIC26.84■■□□□ 1.89
TTC9BQ8N6N2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TTC9BQ8N6N2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TTC9BQ8N6N2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TTC9BQ8N6N2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.82■■□□□ 1.88
TTC9BQ8N6N2 ABCB10P3-201ENST00000561950 2166 ntBASIC26.82■■□□□ 1.88
TTC9BQ8N6N2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
TTC9BQ8N6N2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.81■■□□□ 1.88
TTC9BQ8N6N2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TTC9BQ8N6N2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TTC9BQ8N6N2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TTC9BQ8N6N2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
TTC9BQ8N6N2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.8■■□□□ 1.88
TTC9BQ8N6N2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TTC9BQ8N6N2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
TTC9BQ8N6N2 RNF126P1-201ENST00000567452 1320 ntBASIC26.79■■□□□ 1.88
TTC9BQ8N6N2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.78■■□□□ 1.88
TTC9BQ8N6N2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TTC9BQ8N6N2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
TTC9BQ8N6N2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
TTC9BQ8N6N2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
TTC9BQ8N6N2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.77■■□□□ 1.88
TTC9BQ8N6N2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
TTC9BQ8N6N2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.76■■□□□ 1.87
TTC9BQ8N6N2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.75■■□□□ 1.87
TTC9BQ8N6N2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
TTC9BQ8N6N2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
TTC9BQ8N6N2 AC060814.1-201ENST00000554326 538 ntBASIC26.74■■□□□ 1.87
TTC9BQ8N6N2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
TTC9BQ8N6N2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TTC9BQ8N6N2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TTC9BQ8N6N2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TTC9BQ8N6N2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TTC9BQ8N6N2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
TTC9BQ8N6N2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TTC9BQ8N6N2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.71■■□□□ 1.87
TTC9BQ8N6N2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.71■■□□□ 1.87
TTC9BQ8N6N2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.7■■□□□ 1.87
TTC9BQ8N6N2 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.7■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms