Protein–RNA interactions for Protein: Q8N1V2

CFAP52, Cilia- and flagella-associated protein 52, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP52Q8N1V2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CFAP52Q8N1V2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CFAP52Q8N1V2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CFAP52Q8N1V2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CFAP52Q8N1V2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CFAP52Q8N1V2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CFAP52Q8N1V2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.26■■□□□ 1.79
CFAP52Q8N1V2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CFAP52Q8N1V2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CFAP52Q8N1V2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CFAP52Q8N1V2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CFAP52Q8N1V2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CFAP52Q8N1V2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.23■■□□□ 1.79
CFAP52Q8N1V2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.23■■□□□ 1.79
CFAP52Q8N1V2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.23■■□□□ 1.79
CFAP52Q8N1V2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CFAP52Q8N1V2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
CFAP52Q8N1V2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
CFAP52Q8N1V2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
CFAP52Q8N1V2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.22■■□□□ 1.79
CFAP52Q8N1V2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CFAP52Q8N1V2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.22■■□□□ 1.79
CFAP52Q8N1V2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.22■■□□□ 1.79
CFAP52Q8N1V2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CFAP52Q8N1V2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.22■■□□□ 1.79
CFAP52Q8N1V2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CFAP52Q8N1V2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CFAP52Q8N1V2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CFAP52Q8N1V2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
CFAP52Q8N1V2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
CFAP52Q8N1V2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CFAP52Q8N1V2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.2■■□□□ 1.78
CFAP52Q8N1V2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CFAP52Q8N1V2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.78
CFAP52Q8N1V2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.2■■□□□ 1.78
CFAP52Q8N1V2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CFAP52Q8N1V2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
CFAP52Q8N1V2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CFAP52Q8N1V2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.18■■□□□ 1.78
CFAP52Q8N1V2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.18■■□□□ 1.78
CFAP52Q8N1V2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
CFAP52Q8N1V2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CFAP52Q8N1V2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CFAP52Q8N1V2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.16■■□□□ 1.78
CFAP52Q8N1V2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
CFAP52Q8N1V2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.16■■□□□ 1.78
CFAP52Q8N1V2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CFAP52Q8N1V2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CFAP52Q8N1V2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CFAP52Q8N1V2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
CFAP52Q8N1V2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.15■■□□□ 1.78
CFAP52Q8N1V2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CFAP52Q8N1V2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CFAP52Q8N1V2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CFAP52Q8N1V2 AC008813.1-201ENST00000536597 885 ntBASIC26.14■■□□□ 1.78
CFAP52Q8N1V2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.14■■□□□ 1.78
CFAP52Q8N1V2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CFAP52Q8N1V2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CFAP52Q8N1V2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.12■■□□□ 1.77
CFAP52Q8N1V2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
CFAP52Q8N1V2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.1■■□□□ 1.77
CFAP52Q8N1V2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CFAP52Q8N1V2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CFAP52Q8N1V2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CFAP52Q8N1V2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CFAP52Q8N1V2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.1■■□□□ 1.77
CFAP52Q8N1V2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.1■■□□□ 1.77
CFAP52Q8N1V2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CFAP52Q8N1V2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CFAP52Q8N1V2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
CFAP52Q8N1V2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
CFAP52Q8N1V2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
CFAP52Q8N1V2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
CFAP52Q8N1V2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
CFAP52Q8N1V2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CFAP52Q8N1V2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CFAP52Q8N1V2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
CFAP52Q8N1V2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CFAP52Q8N1V2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CFAP52Q8N1V2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.08■■□□□ 1.77
CFAP52Q8N1V2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
CFAP52Q8N1V2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CFAP52Q8N1V2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
CFAP52Q8N1V2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
CFAP52Q8N1V2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.07■■□□□ 1.76
CFAP52Q8N1V2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.07■■□□□ 1.76
CFAP52Q8N1V2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CFAP52Q8N1V2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
CFAP52Q8N1V2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CFAP52Q8N1V2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.05■■□□□ 1.76
CFAP52Q8N1V2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CFAP52Q8N1V2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CFAP52Q8N1V2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CFAP52Q8N1V2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
CFAP52Q8N1V2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
CFAP52Q8N1V2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
CFAP52Q8N1V2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.03■■□□□ 1.76
CFAP52Q8N1V2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CFAP52Q8N1V2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
CFAP52Q8N1V2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms