Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.56■■■□□ 2.16
CCDC60Q8IWA6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.55■■■□□ 2.16
CCDC60Q8IWA6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CCDC60Q8IWA6 AC008813.1-201ENST00000536597 885 ntBASIC28.55■■■□□ 2.16
CCDC60Q8IWA6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.55■■■□□ 2.16
CCDC60Q8IWA6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CCDC60Q8IWA6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CCDC60Q8IWA6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CCDC60Q8IWA6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
CCDC60Q8IWA6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CCDC60Q8IWA6 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.54■■■□□ 2.16
CCDC60Q8IWA6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
CCDC60Q8IWA6 HSD17B1P1-201ENST00000590052 955 ntBASIC28.54■■■□□ 2.16
CCDC60Q8IWA6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CCDC60Q8IWA6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CCDC60Q8IWA6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.53■■■□□ 2.16
CCDC60Q8IWA6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CCDC60Q8IWA6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
CCDC60Q8IWA6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.52■■■□□ 2.16
CCDC60Q8IWA6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
CCDC60Q8IWA6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CCDC60Q8IWA6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CCDC60Q8IWA6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
CCDC60Q8IWA6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
CCDC60Q8IWA6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.49■■■□□ 2.15
CCDC60Q8IWA6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
CCDC60Q8IWA6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CCDC60Q8IWA6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CCDC60Q8IWA6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.48■■■□□ 2.15
CCDC60Q8IWA6 ABCB10P3-201ENST00000561950 2166 ntBASIC28.48■■■□□ 2.15
CCDC60Q8IWA6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CCDC60Q8IWA6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
CCDC60Q8IWA6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.47■■■□□ 2.15
CCDC60Q8IWA6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.46■■■□□ 2.15
CCDC60Q8IWA6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.46■■■□□ 2.15
CCDC60Q8IWA6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.45■■■□□ 2.15
CCDC60Q8IWA6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
CCDC60Q8IWA6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.45■■■□□ 2.14
CCDC60Q8IWA6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.45■■■□□ 2.14
CCDC60Q8IWA6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
CCDC60Q8IWA6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.44■■■□□ 2.14
CCDC60Q8IWA6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CCDC60Q8IWA6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
CCDC60Q8IWA6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CCDC60Q8IWA6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CCDC60Q8IWA6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
CCDC60Q8IWA6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CCDC60Q8IWA6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.43■■■□□ 2.14
CCDC60Q8IWA6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC28.43■■■□□ 2.14
CCDC60Q8IWA6 AC148477.6-201ENST00000623746 465 ntBASIC28.43■■■□□ 2.14
CCDC60Q8IWA6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.43■■■□□ 2.14
CCDC60Q8IWA6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CCDC60Q8IWA6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.42■■■□□ 2.14
CCDC60Q8IWA6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.42■■■□□ 2.14
CCDC60Q8IWA6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CCDC60Q8IWA6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC60Q8IWA6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CCDC60Q8IWA6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.4■■■□□ 2.14
CCDC60Q8IWA6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.4■■■□□ 2.14
CCDC60Q8IWA6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
CCDC60Q8IWA6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CCDC60Q8IWA6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
CCDC60Q8IWA6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.39■■■□□ 2.14
CCDC60Q8IWA6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.39■■■□□ 2.13
CCDC60Q8IWA6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.39■■■□□ 2.13
CCDC60Q8IWA6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC28.38■■■□□ 2.13
CCDC60Q8IWA6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC60Q8IWA6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.38■■■□□ 2.13
CCDC60Q8IWA6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CCDC60Q8IWA6 MIR219A2-201ENST00000608502 1504 ntBASIC28.38■■■□□ 2.13
CCDC60Q8IWA6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.37■■■□□ 2.13
CCDC60Q8IWA6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.36■■■□□ 2.13
CCDC60Q8IWA6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
CCDC60Q8IWA6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.36■■■□□ 2.13
CCDC60Q8IWA6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC60Q8IWA6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC60Q8IWA6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC60Q8IWA6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CCDC60Q8IWA6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.35■■■□□ 2.13
CCDC60Q8IWA6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CCDC60Q8IWA6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CCDC60Q8IWA6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
CCDC60Q8IWA6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.35■■■□□ 2.13
CCDC60Q8IWA6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CCDC60Q8IWA6 GPX1-201ENST00000419349 1106 ntBASIC28.34■■■□□ 2.13
CCDC60Q8IWA6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
CCDC60Q8IWA6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
CCDC60Q8IWA6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CCDC60Q8IWA6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.32■■■□□ 2.12
CCDC60Q8IWA6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CCDC60Q8IWA6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCDC60Q8IWA6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.31■■■□□ 2.12
CCDC60Q8IWA6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.31■■■□□ 2.12
CCDC60Q8IWA6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
CCDC60Q8IWA6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCDC60Q8IWA6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CCDC60Q8IWA6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.3■■■□□ 2.12
CCDC60Q8IWA6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC60Q8IWA6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC60Q8IWA6 AC139426.1-201ENST00000568218 2529 ntBASIC28.29■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms