Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.55■■■□□ 2.16
TRIM50Q86XT4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.55■■■□□ 2.16
TRIM50Q86XT4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TRIM50Q86XT4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TRIM50Q86XT4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.54■■■□□ 2.16
TRIM50Q86XT4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TRIM50Q86XT4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.54■■■□□ 2.16
TRIM50Q86XT4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
TRIM50Q86XT4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.54■■■□□ 2.16
TRIM50Q86XT4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
TRIM50Q86XT4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
TRIM50Q86XT4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
TRIM50Q86XT4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TRIM50Q86XT4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TRIM50Q86XT4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC28.52■■■□□ 2.16
TRIM50Q86XT4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TRIM50Q86XT4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.52■■■□□ 2.16
TRIM50Q86XT4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
TRIM50Q86XT4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
TRIM50Q86XT4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.52■■■□□ 2.16
TRIM50Q86XT4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
TRIM50Q86XT4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
TRIM50Q86XT4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.51■■■□□ 2.15
TRIM50Q86XT4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
TRIM50Q86XT4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
TRIM50Q86XT4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.5■■■□□ 2.15
TRIM50Q86XT4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.5■■■□□ 2.15
TRIM50Q86XT4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
TRIM50Q86XT4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
TRIM50Q86XT4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
TRIM50Q86XT4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.49■■■□□ 2.15
TRIM50Q86XT4 AC022413.1-201ENST00000624602 984 ntBASIC28.49■■■□□ 2.15
TRIM50Q86XT4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
TRIM50Q86XT4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
TRIM50Q86XT4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.48■■■□□ 2.15
TRIM50Q86XT4 AC148477.6-201ENST00000623746 465 ntBASIC28.48■■■□□ 2.15
TRIM50Q86XT4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
TRIM50Q86XT4 RNF126P1-201ENST00000567452 1320 ntBASIC28.47■■■□□ 2.15
TRIM50Q86XT4 AC100797.4-201ENST00000631653 1827 ntBASIC28.47■■■□□ 2.15
TRIM50Q86XT4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
TRIM50Q86XT4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.46■■■□□ 2.15
TRIM50Q86XT4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.46■■■□□ 2.15
TRIM50Q86XT4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
TRIM50Q86XT4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
TRIM50Q86XT4 MIR219A2-201ENST00000608502 1504 ntBASIC28.45■■■□□ 2.15
TRIM50Q86XT4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
TRIM50Q86XT4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
TRIM50Q86XT4 ABCB10P1-201ENST00000614297 2181 ntBASIC28.44■■■□□ 2.14
TRIM50Q86XT4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
TRIM50Q86XT4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
TRIM50Q86XT4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.43■■■□□ 2.14
TRIM50Q86XT4 AP004833.2-201ENST00000532228 1454 ntBASIC28.43■■■□□ 2.14
TRIM50Q86XT4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
TRIM50Q86XT4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.42■■■□□ 2.14
TRIM50Q86XT4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
TRIM50Q86XT4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.41■■■□□ 2.14
TRIM50Q86XT4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.4■■■□□ 2.14
TRIM50Q86XT4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TRIM50Q86XT4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.4■■■□□ 2.14
TRIM50Q86XT4 ABHD17AP5-201ENST00000580133 923 ntBASIC28.4■■■□□ 2.14
TRIM50Q86XT4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
TRIM50Q86XT4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
TRIM50Q86XT4 AL139393.2-201ENST00000608721 2025 ntBASIC28.39■■■□□ 2.14
TRIM50Q86XT4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.39■■■□□ 2.13
TRIM50Q86XT4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.38■■■□□ 2.13
TRIM50Q86XT4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TRIM50Q86XT4 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.37■■■□□ 2.13
TRIM50Q86XT4 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.37■■■□□ 2.13
TRIM50Q86XT4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.37■■■□□ 2.13
TRIM50Q86XT4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TRIM50Q86XT4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
TRIM50Q86XT4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
TRIM50Q86XT4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
TRIM50Q86XT4 AC060814.1-201ENST00000554326 538 ntBASIC28.36■■■□□ 2.13
TRIM50Q86XT4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
TRIM50Q86XT4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.36■■■□□ 2.13
TRIM50Q86XT4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
TRIM50Q86XT4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
TRIM50Q86XT4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TRIM50Q86XT4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRIM50Q86XT4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.33■■■□□ 2.13
TRIM50Q86XT4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TRIM50Q86XT4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
TRIM50Q86XT4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
TRIM50Q86XT4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TRIM50Q86XT4 ABCB10P3-201ENST00000561950 2166 ntBASIC28.31■■■□□ 2.12
TRIM50Q86XT4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM50Q86XT4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
TRIM50Q86XT4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.31■■■□□ 2.12
TRIM50Q86XT4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM50Q86XT4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.3■■■□□ 2.12
TRIM50Q86XT4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.3■■■□□ 2.12
TRIM50Q86XT4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TRIM50Q86XT4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.3■■■□□ 2.12
TRIM50Q86XT4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
TRIM50Q86XT4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
TRIM50Q86XT4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TRIM50Q86XT4 MED25-210ENST00000612854 801 ntTSL 5 BASIC28.28■■■□□ 2.12
TRIM50Q86XT4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
TRIM50Q86XT4 MED25-214ENST00000622402 642 ntTSL 5 BASIC28.28■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms