Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RAB11FIP1Q6WKZ4 GPX1-201ENST00000419349 1106 ntBASIC25.64■■□□□ 1.7
RAB11FIP1Q6WKZ4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RAB11FIP1Q6WKZ4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
RAB11FIP1Q6WKZ4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RAB11FIP1Q6WKZ4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.63■■□□□ 1.69
RAB11FIP1Q6WKZ4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RAB11FIP1Q6WKZ4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RAB11FIP1Q6WKZ4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RAB11FIP1Q6WKZ4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.62■■□□□ 1.69
RAB11FIP1Q6WKZ4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
RAB11FIP1Q6WKZ4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RAB11FIP1Q6WKZ4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RAB11FIP1Q6WKZ4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.61■■□□□ 1.69
RAB11FIP1Q6WKZ4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RAB11FIP1Q6WKZ4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RAB11FIP1Q6WKZ4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.6■■□□□ 1.69
RAB11FIP1Q6WKZ4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.6■■□□□ 1.69
RAB11FIP1Q6WKZ4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.6■■□□□ 1.69
RAB11FIP1Q6WKZ4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
RAB11FIP1Q6WKZ4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.59■■□□□ 1.69
RAB11FIP1Q6WKZ4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
RAB11FIP1Q6WKZ4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.58■■□□□ 1.69
RAB11FIP1Q6WKZ4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.58■■□□□ 1.69
RAB11FIP1Q6WKZ4 AC022413.1-201ENST00000624602 984 ntBASIC25.57■■□□□ 1.68
RAB11FIP1Q6WKZ4 AP004833.2-201ENST00000532228 1454 ntBASIC25.57■■□□□ 1.68
RAB11FIP1Q6WKZ4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RAB11FIP1Q6WKZ4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
RAB11FIP1Q6WKZ4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
RAB11FIP1Q6WKZ4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
RAB11FIP1Q6WKZ4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RAB11FIP1Q6WKZ4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RAB11FIP1Q6WKZ4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.56■■□□□ 1.68
RAB11FIP1Q6WKZ4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RAB11FIP1Q6WKZ4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.56■■□□□ 1.68
RAB11FIP1Q6WKZ4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.55■■□□□ 1.68
RAB11FIP1Q6WKZ4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RAB11FIP1Q6WKZ4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.55■■□□□ 1.68
RAB11FIP1Q6WKZ4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
RAB11FIP1Q6WKZ4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RAB11FIP1Q6WKZ4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RAB11FIP1Q6WKZ4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RAB11FIP1Q6WKZ4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.54■■□□□ 1.68
RAB11FIP1Q6WKZ4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RAB11FIP1Q6WKZ4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
RAB11FIP1Q6WKZ4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RAB11FIP1Q6WKZ4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
RAB11FIP1Q6WKZ4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.53■■□□□ 1.68
RAB11FIP1Q6WKZ4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
RAB11FIP1Q6WKZ4 AC100797.4-201ENST00000631653 1827 ntBASIC25.52■■□□□ 1.68
RAB11FIP1Q6WKZ4 RARRES2P2-201ENST00000394842 485 ntBASIC25.52■■□□□ 1.68
RAB11FIP1Q6WKZ4 AC148477.6-201ENST00000623746 465 ntBASIC25.52■■□□□ 1.68
RAB11FIP1Q6WKZ4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RAB11FIP1Q6WKZ4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.51■■□□□ 1.67
RAB11FIP1Q6WKZ4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.51■■□□□ 1.67
RAB11FIP1Q6WKZ4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
RAB11FIP1Q6WKZ4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RAB11FIP1Q6WKZ4 RNF126P1-201ENST00000567452 1320 ntBASIC25.5■■□□□ 1.67
RAB11FIP1Q6WKZ4 MIR219A2-201ENST00000608502 1504 ntBASIC25.5■■□□□ 1.67
RAB11FIP1Q6WKZ4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.5■■□□□ 1.67
RAB11FIP1Q6WKZ4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.49■■□□□ 1.67
RAB11FIP1Q6WKZ4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
RAB11FIP1Q6WKZ4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
RAB11FIP1Q6WKZ4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RAB11FIP1Q6WKZ4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RAB11FIP1Q6WKZ4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.46■■□□□ 1.67
RAB11FIP1Q6WKZ4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.46■■□□□ 1.67
RAB11FIP1Q6WKZ4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RAB11FIP1Q6WKZ4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.46■■□□□ 1.67
RAB11FIP1Q6WKZ4 ABCB10P1-201ENST00000614297 2181 ntBASIC25.46■■□□□ 1.67
RAB11FIP1Q6WKZ4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RAB11FIP1Q6WKZ4 AL139393.2-201ENST00000608721 2025 ntBASIC25.46■■□□□ 1.67
RAB11FIP1Q6WKZ4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.44■■□□□ 1.66
RAB11FIP1Q6WKZ4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
RAB11FIP1Q6WKZ4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
RAB11FIP1Q6WKZ4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RAB11FIP1Q6WKZ4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.43■■□□□ 1.66
RAB11FIP1Q6WKZ4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RAB11FIP1Q6WKZ4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
RAB11FIP1Q6WKZ4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.43■■□□□ 1.66
RAB11FIP1Q6WKZ4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.43■■□□□ 1.66
RAB11FIP1Q6WKZ4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
RAB11FIP1Q6WKZ4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
RAB11FIP1Q6WKZ4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
RAB11FIP1Q6WKZ4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RAB11FIP1Q6WKZ4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.41■■□□□ 1.66
RAB11FIP1Q6WKZ4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.41■■□□□ 1.66
RAB11FIP1Q6WKZ4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RAB11FIP1Q6WKZ4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.4■■□□□ 1.66
RAB11FIP1Q6WKZ4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RAB11FIP1Q6WKZ4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RAB11FIP1Q6WKZ4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RAB11FIP1Q6WKZ4 ABHD17AP5-201ENST00000580133 923 ntBASIC25.39■■□□□ 1.66
RAB11FIP1Q6WKZ4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
RAB11FIP1Q6WKZ4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
RAB11FIP1Q6WKZ4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RAB11FIP1Q6WKZ4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RAB11FIP1Q6WKZ4 AC060814.1-201ENST00000554326 538 ntBASIC25.38■■□□□ 1.65
RAB11FIP1Q6WKZ4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RAB11FIP1Q6WKZ4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms