Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
CNKSR3Q6P9H4 KRT18P60-201ENST00000312876 1297 ntBASIC27.9■■■□□ 2.06
CNKSR3Q6P9H4 TSPY13P-201ENST00000338964 914 ntBASIC27.9■■■□□ 2.06
CNKSR3Q6P9H4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CNKSR3Q6P9H4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
CNKSR3Q6P9H4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC27.88■■■□□ 2.05
CNKSR3Q6P9H4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
CNKSR3Q6P9H4 ECEL1P2-201ENST00000461596 1295 ntBASIC27.88■■■□□ 2.05
CNKSR3Q6P9H4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC27.88■■■□□ 2.05
CNKSR3Q6P9H4 GFER-205ENST00000569451 517 ntTSL 5 BASIC27.88■■■□□ 2.05
CNKSR3Q6P9H4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
CNKSR3Q6P9H4 AC004987.1-201ENST00000428627 508 ntBASIC27.87■■■□□ 2.05
CNKSR3Q6P9H4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
CNKSR3Q6P9H4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.87■■■□□ 2.05
CNKSR3Q6P9H4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
CNKSR3Q6P9H4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
CNKSR3Q6P9H4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC27.86■■■□□ 2.05
CNKSR3Q6P9H4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
CNKSR3Q6P9H4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CNKSR3Q6P9H4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.85■■■□□ 2.05
CNKSR3Q6P9H4 ATP5G2P3-201ENST00000429083 425 ntBASIC27.85■■■□□ 2.05
CNKSR3Q6P9H4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
CNKSR3Q6P9H4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC27.85■■■□□ 2.05
CNKSR3Q6P9H4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
CNKSR3Q6P9H4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.85■■■□□ 2.05
CNKSR3Q6P9H4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
CNKSR3Q6P9H4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CNKSR3Q6P9H4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
CNKSR3Q6P9H4 AC126177.7-201ENST00000547904 679 ntBASIC27.84■■■□□ 2.05
CNKSR3Q6P9H4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CNKSR3Q6P9H4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.83■■■□□ 2.05
CNKSR3Q6P9H4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.05
CNKSR3Q6P9H4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC27.83■■■□□ 2.05
CNKSR3Q6P9H4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
CNKSR3Q6P9H4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CNKSR3Q6P9H4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC27.82■■■□□ 2.04
CNKSR3Q6P9H4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.82■■■□□ 2.04
CNKSR3Q6P9H4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CNKSR3Q6P9H4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
CNKSR3Q6P9H4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC27.81■■■□□ 2.04
CNKSR3Q6P9H4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.8■■■□□ 2.04
CNKSR3Q6P9H4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CNKSR3Q6P9H4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC27.79■■■□□ 2.04
CNKSR3Q6P9H4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.78■■■□□ 2.04
CNKSR3Q6P9H4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC27.78■■■□□ 2.04
CNKSR3Q6P9H4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CNKSR3Q6P9H4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CNKSR3Q6P9H4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC27.77■■■□□ 2.04
CNKSR3Q6P9H4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CNKSR3Q6P9H4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CNKSR3Q6P9H4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CNKSR3Q6P9H4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CNKSR3Q6P9H4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC27.76■■■□□ 2.04
CNKSR3Q6P9H4 MED25-210ENST00000612854 801 ntTSL 5 BASIC27.76■■■□□ 2.03
CNKSR3Q6P9H4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
CNKSR3Q6P9H4 MED25-214ENST00000622402 642 ntTSL 5 BASIC27.76■■■□□ 2.03
CNKSR3Q6P9H4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
CNKSR3Q6P9H4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CNKSR3Q6P9H4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
CNKSR3Q6P9H4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC27.74■■■□□ 2.03
CNKSR3Q6P9H4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.74■■■□□ 2.03
CNKSR3Q6P9H4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CNKSR3Q6P9H4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
CNKSR3Q6P9H4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CNKSR3Q6P9H4 RARRES2P1-201ENST00000474487 481 ntBASIC27.73■■■□□ 2.03
CNKSR3Q6P9H4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CNKSR3Q6P9H4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CNKSR3Q6P9H4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CNKSR3Q6P9H4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC27.72■■■□□ 2.03
CNKSR3Q6P9H4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CNKSR3Q6P9H4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CNKSR3Q6P9H4 AL157400.5-201ENST00000507624 621 ntBASIC27.72■■■□□ 2.03
CNKSR3Q6P9H4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CNKSR3Q6P9H4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC27.71■■■□□ 2.03
CNKSR3Q6P9H4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC27.71■■■□□ 2.03
CNKSR3Q6P9H4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CNKSR3Q6P9H4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.7■■■□□ 2.03
CNKSR3Q6P9H4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
CNKSR3Q6P9H4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CNKSR3Q6P9H4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CNKSR3Q6P9H4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CNKSR3Q6P9H4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CNKSR3Q6P9H4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CNKSR3Q6P9H4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC27.68■■■□□ 2.02
CNKSR3Q6P9H4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC27.68■■■□□ 2.02
CNKSR3Q6P9H4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
CNKSR3Q6P9H4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CNKSR3Q6P9H4 AC007029.1-201ENST00000604183 313 ntBASIC27.66■■■□□ 2.02
CNKSR3Q6P9H4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CNKSR3Q6P9H4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.65■■■□□ 2.02
CNKSR3Q6P9H4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
CNKSR3Q6P9H4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CNKSR3Q6P9H4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.64■■■□□ 2.01
CNKSR3Q6P9H4 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.64■■■□□ 2.01
CNKSR3Q6P9H4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
CNKSR3Q6P9H4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.63■■■□□ 2.01
CNKSR3Q6P9H4 AC129492.7-201ENST00000622992 756 ntBASIC27.63■■■□□ 2.01
CNKSR3Q6P9H4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.63■■■□□ 2.01
CNKSR3Q6P9H4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CNKSR3Q6P9H4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms