Protein–RNA interactions for Protein: Q6B0I6

KDM4D, Lysine-specific demethylase 4D, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4DQ6B0I6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
KDM4DQ6B0I6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
KDM4DQ6B0I6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
KDM4DQ6B0I6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
KDM4DQ6B0I6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.3■■□□□ 1.32
KDM4DQ6B0I6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
KDM4DQ6B0I6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.29■■□□□ 1.32
KDM4DQ6B0I6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
KDM4DQ6B0I6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
KDM4DQ6B0I6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.29■■□□□ 1.32
KDM4DQ6B0I6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
KDM4DQ6B0I6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.28■■□□□ 1.32
KDM4DQ6B0I6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KDM4DQ6B0I6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.27■■□□□ 1.32
KDM4DQ6B0I6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
KDM4DQ6B0I6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
KDM4DQ6B0I6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
KDM4DQ6B0I6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
KDM4DQ6B0I6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
KDM4DQ6B0I6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
KDM4DQ6B0I6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
KDM4DQ6B0I6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
KDM4DQ6B0I6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
KDM4DQ6B0I6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KDM4DQ6B0I6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
KDM4DQ6B0I6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.25■■□□□ 1.31
KDM4DQ6B0I6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
KDM4DQ6B0I6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
KDM4DQ6B0I6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
KDM4DQ6B0I6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
KDM4DQ6B0I6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
KDM4DQ6B0I6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.24■■□□□ 1.31
KDM4DQ6B0I6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.23■■□□□ 1.31
KDM4DQ6B0I6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
KDM4DQ6B0I6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
KDM4DQ6B0I6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.22■■□□□ 1.31
KDM4DQ6B0I6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.22■■□□□ 1.31
KDM4DQ6B0I6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
KDM4DQ6B0I6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
KDM4DQ6B0I6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
KDM4DQ6B0I6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.21■■□□□ 1.31
KDM4DQ6B0I6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
KDM4DQ6B0I6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
KDM4DQ6B0I6 AC145676.1-201ENST00000514988 2004 ntBASIC23.21■■□□□ 1.31
KDM4DQ6B0I6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
KDM4DQ6B0I6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
KDM4DQ6B0I6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
KDM4DQ6B0I6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
KDM4DQ6B0I6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
KDM4DQ6B0I6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.19■■□□□ 1.3
KDM4DQ6B0I6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KDM4DQ6B0I6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.19■■□□□ 1.3
KDM4DQ6B0I6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
KDM4DQ6B0I6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
KDM4DQ6B0I6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.18■■□□□ 1.3
KDM4DQ6B0I6 AC020928.2-201ENST00000588717 2197 ntBASIC23.18■■□□□ 1.3
KDM4DQ6B0I6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KDM4DQ6B0I6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
KDM4DQ6B0I6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
KDM4DQ6B0I6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KDM4DQ6B0I6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KDM4DQ6B0I6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KDM4DQ6B0I6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KDM4DQ6B0I6 AC018358.1-201ENST00000631079 1402 ntBASIC23.16■■□□□ 1.3
KDM4DQ6B0I6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.15■■□□□ 1.3
KDM4DQ6B0I6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KDM4DQ6B0I6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KDM4DQ6B0I6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
KDM4DQ6B0I6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
KDM4DQ6B0I6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC23.15■■□□□ 1.3
KDM4DQ6B0I6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.15■■□□□ 1.3
KDM4DQ6B0I6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
KDM4DQ6B0I6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.15■■□□□ 1.3
KDM4DQ6B0I6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.14■■□□□ 1.29
KDM4DQ6B0I6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
KDM4DQ6B0I6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
KDM4DQ6B0I6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
KDM4DQ6B0I6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.13■■□□□ 1.29
KDM4DQ6B0I6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
KDM4DQ6B0I6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
KDM4DQ6B0I6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
KDM4DQ6B0I6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.12■■□□□ 1.29
KDM4DQ6B0I6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.12■■□□□ 1.29
KDM4DQ6B0I6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.12■■□□□ 1.29
KDM4DQ6B0I6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
KDM4DQ6B0I6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
KDM4DQ6B0I6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
KDM4DQ6B0I6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.11■■□□□ 1.29
KDM4DQ6B0I6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
KDM4DQ6B0I6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
KDM4DQ6B0I6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
KDM4DQ6B0I6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
KDM4DQ6B0I6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KDM4DQ6B0I6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KDM4DQ6B0I6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.09■■□□□ 1.29
KDM4DQ6B0I6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KDM4DQ6B0I6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.08■■□□□ 1.29
KDM4DQ6B0I6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.07■■□□□ 1.28
KDM4DQ6B0I6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC23.07■■□□□ 1.28
KDM4DQ6B0I6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms