Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 AC008813.1-201ENST00000536597 885 ntBASIC32.68■■■□□ 2.82
CCDC30Q5VVM6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC32.68■■■□□ 2.82
CCDC30Q5VVM6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC32.67■■■□□ 2.82
CCDC30Q5VVM6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC32.67■■■□□ 2.82
CCDC30Q5VVM6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
CCDC30Q5VVM6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC32.67■■■□□ 2.82
CCDC30Q5VVM6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC32.67■■■□□ 2.82
CCDC30Q5VVM6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CCDC30Q5VVM6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC32.66■■■□□ 2.82
CCDC30Q5VVM6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC32.66■■■□□ 2.82
CCDC30Q5VVM6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CCDC30Q5VVM6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CCDC30Q5VVM6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC32.65■■■□□ 2.82
CCDC30Q5VVM6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CCDC30Q5VVM6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC32.65■■■□□ 2.82
CCDC30Q5VVM6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CCDC30Q5VVM6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CCDC30Q5VVM6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC32.64■■■□□ 2.82
CCDC30Q5VVM6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC32.63■■■□□ 2.81
CCDC30Q5VVM6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC32.63■■■□□ 2.81
CCDC30Q5VVM6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
CCDC30Q5VVM6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC32.63■■■□□ 2.81
CCDC30Q5VVM6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC32.63■■■□□ 2.81
CCDC30Q5VVM6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC32.63■■■□□ 2.81
CCDC30Q5VVM6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
CCDC30Q5VVM6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CCDC30Q5VVM6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC32.62■■■□□ 2.81
CCDC30Q5VVM6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
CCDC30Q5VVM6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CCDC30Q5VVM6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC32.6■■■□□ 2.81
CCDC30Q5VVM6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
CCDC30Q5VVM6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC32.6■■■□□ 2.81
CCDC30Q5VVM6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC32.6■■■□□ 2.81
CCDC30Q5VVM6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC32.59■■■□□ 2.81
CCDC30Q5VVM6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
CCDC30Q5VVM6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CCDC30Q5VVM6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC32.59■■■□□ 2.81
CCDC30Q5VVM6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC32.58■■■□□ 2.81
CCDC30Q5VVM6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
CCDC30Q5VVM6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC32.56■■■□□ 2.8
CCDC30Q5VVM6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC32.56■■■□□ 2.8
CCDC30Q5VVM6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
CCDC30Q5VVM6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC32.56■■■□□ 2.8
CCDC30Q5VVM6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CCDC30Q5VVM6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
CCDC30Q5VVM6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CCDC30Q5VVM6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CCDC30Q5VVM6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CCDC30Q5VVM6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CCDC30Q5VVM6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
CCDC30Q5VVM6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
CCDC30Q5VVM6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
CCDC30Q5VVM6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC32.56■■■□□ 2.8
CCDC30Q5VVM6 AC139426.1-201ENST00000568218 2529 ntBASIC32.55■■■□□ 2.8
CCDC30Q5VVM6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CCDC30Q5VVM6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC32.53■■■□□ 2.8
CCDC30Q5VVM6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CCDC30Q5VVM6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC32.52■■■□□ 2.8
CCDC30Q5VVM6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
CCDC30Q5VVM6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
CCDC30Q5VVM6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
CCDC30Q5VVM6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC32.51■■■□□ 2.79
CCDC30Q5VVM6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC32.51■■■□□ 2.79
CCDC30Q5VVM6 AC148477.6-201ENST00000623746 465 ntBASIC32.51■■■□□ 2.79
CCDC30Q5VVM6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.79
CCDC30Q5VVM6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC32.51■■■□□ 2.79
CCDC30Q5VVM6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC32.5■■■□□ 2.79
CCDC30Q5VVM6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CCDC30Q5VVM6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CCDC30Q5VVM6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC32.49■■■□□ 2.79
CCDC30Q5VVM6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC32.49■■■□□ 2.79
CCDC30Q5VVM6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CCDC30Q5VVM6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC32.48■■■□□ 2.79
CCDC30Q5VVM6 AP002414.2-202ENST00000590929 1450 ntBASIC32.48■■■□□ 2.79
CCDC30Q5VVM6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC32.47■■■□□ 2.79
CCDC30Q5VVM6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CCDC30Q5VVM6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CCDC30Q5VVM6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC32.45■■■□□ 2.79
CCDC30Q5VVM6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
CCDC30Q5VVM6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC32.44■■■□□ 2.78
CCDC30Q5VVM6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CCDC30Q5VVM6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CCDC30Q5VVM6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC32.44■■■□□ 2.78
CCDC30Q5VVM6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC32.44■■■□□ 2.78
CCDC30Q5VVM6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC32.44■■■□□ 2.78
CCDC30Q5VVM6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
CCDC30Q5VVM6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC32.42■■■□□ 2.78
CCDC30Q5VVM6 MIR219A2-201ENST00000608502 1504 ntBASIC32.42■■■□□ 2.78
CCDC30Q5VVM6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CCDC30Q5VVM6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CCDC30Q5VVM6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CCDC30Q5VVM6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC32.41■■■□□ 2.78
CCDC30Q5VVM6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC32.41■■■□□ 2.78
CCDC30Q5VVM6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CCDC30Q5VVM6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CCDC30Q5VVM6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
CCDC30Q5VVM6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CCDC30Q5VVM6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
CCDC30Q5VVM6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
CCDC30Q5VVM6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC32.4■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms