Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.11■■■□□ 2.41
CERKLQ49MI3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.11■■■□□ 2.41
CERKLQ49MI3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.11■■■□□ 2.41
CERKLQ49MI3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.11■■■□□ 2.41
CERKLQ49MI3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.1■■■□□ 2.41
CERKLQ49MI3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CERKLQ49MI3 AC022413.1-201ENST00000624602 984 ntBASIC30.1■■■□□ 2.41
CERKLQ49MI3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.1■■■□□ 2.41
CERKLQ49MI3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CERKLQ49MI3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
CERKLQ49MI3 AC148477.6-201ENST00000623746 465 ntBASIC30.09■■■□□ 2.41
CERKLQ49MI3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
CERKLQ49MI3 RNF126P1-201ENST00000567452 1320 ntBASIC30.08■■■□□ 2.41
CERKLQ49MI3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
CERKLQ49MI3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CERKLQ49MI3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CERKLQ49MI3 AP004833.2-201ENST00000532228 1454 ntBASIC30.07■■■□□ 2.4
CERKLQ49MI3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CERKLQ49MI3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CERKLQ49MI3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.06■■■□□ 2.4
CERKLQ49MI3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CERKLQ49MI3 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CERKLQ49MI3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CERKLQ49MI3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.05■■■□□ 2.4
CERKLQ49MI3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
CERKLQ49MI3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.04■■■□□ 2.4
CERKLQ49MI3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
CERKLQ49MI3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.03■■■□□ 2.4
CERKLQ49MI3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CERKLQ49MI3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
CERKLQ49MI3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.02■■■□□ 2.4
CERKLQ49MI3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
CERKLQ49MI3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
CERKLQ49MI3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.01■■■□□ 2.39
CERKLQ49MI3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.01■■■□□ 2.39
CERKLQ49MI3 MIR219A2-201ENST00000608502 1504 ntBASIC30.01■■■□□ 2.39
CERKLQ49MI3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30■■■□□ 2.39
CERKLQ49MI3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
CERKLQ49MI3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CERKLQ49MI3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CERKLQ49MI3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CERKLQ49MI3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CERKLQ49MI3 AC100797.4-201ENST00000631653 1827 ntBASIC29.97■■■□□ 2.39
CERKLQ49MI3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CERKLQ49MI3 ABHD17AP5-201ENST00000580133 923 ntBASIC29.96■■■□□ 2.39
CERKLQ49MI3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
CERKLQ49MI3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CERKLQ49MI3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
CERKLQ49MI3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC29.95■■■□□ 2.39
CERKLQ49MI3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.95■■■□□ 2.38
CERKLQ49MI3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
CERKLQ49MI3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
CERKLQ49MI3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
CERKLQ49MI3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
CERKLQ49MI3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CERKLQ49MI3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC29.93■■■□□ 2.38
CERKLQ49MI3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
CERKLQ49MI3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CERKLQ49MI3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
CERKLQ49MI3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.92■■■□□ 2.38
CERKLQ49MI3 AC060814.1-201ENST00000554326 538 ntBASIC29.91■■■□□ 2.38
CERKLQ49MI3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.9■■■□□ 2.38
CERKLQ49MI3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC29.9■■■□□ 2.38
CERKLQ49MI3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.89■■■□□ 2.38
CERKLQ49MI3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.89■■■□□ 2.38
CERKLQ49MI3 AL139393.2-201ENST00000608721 2025 ntBASIC29.88■■■□□ 2.37
CERKLQ49MI3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC29.88■■■□□ 2.37
CERKLQ49MI3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CERKLQ49MI3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC29.87■■■□□ 2.37
CERKLQ49MI3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CERKLQ49MI3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CERKLQ49MI3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CERKLQ49MI3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.86■■■□□ 2.37
CERKLQ49MI3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CERKLQ49MI3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC29.85■■■□□ 2.37
CERKLQ49MI3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CERKLQ49MI3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CERKLQ49MI3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
CERKLQ49MI3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC29.84■■■□□ 2.37
CERKLQ49MI3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC29.84■■■□□ 2.37
CERKLQ49MI3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CERKLQ49MI3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CERKLQ49MI3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.36
CERKLQ49MI3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CERKLQ49MI3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC29.81■■■□□ 2.36
CERKLQ49MI3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CERKLQ49MI3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC29.81■■■□□ 2.36
CERKLQ49MI3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.81■■■□□ 2.36
CERKLQ49MI3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.8■■■□□ 2.36
CERKLQ49MI3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CERKLQ49MI3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC29.8■■■□□ 2.36
CERKLQ49MI3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
CERKLQ49MI3 ABCB10P1-201ENST00000614297 2181 ntBASIC29.79■■■□□ 2.36
CERKLQ49MI3 ABCB10P3-201ENST00000561950 2166 ntBASIC29.79■■■□□ 2.36
CERKLQ49MI3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
CERKLQ49MI3 MED25-210ENST00000612854 801 ntTSL 5 BASIC29.78■■■□□ 2.36
CERKLQ49MI3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CERKLQ49MI3 MED25-214ENST00000622402 642 ntTSL 5 BASIC29.78■■■□□ 2.36
CERKLQ49MI3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC29.78■■■□□ 2.36
CERKLQ49MI3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms