Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.45■■■□□ 2.14
TRIM60Q495X7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
TRIM60Q495X7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
TRIM60Q495X7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.44■■■□□ 2.14
TRIM60Q495X7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
TRIM60Q495X7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.43■■■□□ 2.14
TRIM60Q495X7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC28.43■■■□□ 2.14
TRIM60Q495X7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TRIM60Q495X7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
TRIM60Q495X7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
TRIM60Q495X7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.42■■■□□ 2.14
TRIM60Q495X7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
TRIM60Q495X7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
TRIM60Q495X7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC28.41■■■□□ 2.14
TRIM60Q495X7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.41■■■□□ 2.14
TRIM60Q495X7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
TRIM60Q495X7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
TRIM60Q495X7 HES4-204ENST00000484667 667 ntTSL 3 BASIC28.4■■■□□ 2.14
TRIM60Q495X7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
TRIM60Q495X7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.39■■■□□ 2.14
TRIM60Q495X7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TRIM60Q495X7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
TRIM60Q495X7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TRIM60Q495X7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC28.37■■■□□ 2.13
TRIM60Q495X7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
TRIM60Q495X7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.36■■■□□ 2.13
TRIM60Q495X7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TRIM60Q495X7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
TRIM60Q495X7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
TRIM60Q495X7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
TRIM60Q495X7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRIM60Q495X7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRIM60Q495X7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TRIM60Q495X7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
TRIM60Q495X7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.33■■■□□ 2.13
TRIM60Q495X7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.33■■■□□ 2.13
TRIM60Q495X7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC28.33■■■□□ 2.13
TRIM60Q495X7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC28.33■■■□□ 2.13
TRIM60Q495X7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TRIM60Q495X7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
TRIM60Q495X7 DUX4L18-201ENST00000553347 1267 ntBASIC28.32■■■□□ 2.12
TRIM60Q495X7 AC129492.7-201ENST00000622992 756 ntBASIC28.32■■■□□ 2.12
TRIM60Q495X7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
TRIM60Q495X7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM60Q495X7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM60Q495X7 MED25-210ENST00000612854 801 ntTSL 5 BASIC28.31■■■□□ 2.12
TRIM60Q495X7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM60Q495X7 MED25-214ENST00000622402 642 ntTSL 5 BASIC28.31■■■□□ 2.12
TRIM60Q495X7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TRIM60Q495X7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
TRIM60Q495X7 AC126177.7-201ENST00000547904 679 ntBASIC28.3■■■□□ 2.12
TRIM60Q495X7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.3■■■□□ 2.12
TRIM60Q495X7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
TRIM60Q495X7 AL035685.1-201ENST00000636663 812 ntBASIC28.3■■■□□ 2.12
TRIM60Q495X7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.29■■■□□ 2.12
TRIM60Q495X7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.29■■■□□ 2.12
TRIM60Q495X7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC28.28■■■□□ 2.12
TRIM60Q495X7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TRIM60Q495X7 AL157400.5-201ENST00000507624 621 ntBASIC28.28■■■□□ 2.12
TRIM60Q495X7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC28.28■■■□□ 2.12
TRIM60Q495X7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
TRIM60Q495X7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TRIM60Q495X7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC28.27■■■□□ 2.12
TRIM60Q495X7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
TRIM60Q495X7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TRIM60Q495X7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC28.26■■■□□ 2.12
TRIM60Q495X7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
TRIM60Q495X7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
TRIM60Q495X7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TRIM60Q495X7 AL592293.1-201ENST00000502889 1188 ntBASIC28.25■■■□□ 2.11
TRIM60Q495X7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC28.25■■■□□ 2.11
TRIM60Q495X7 AL451085.2-201ENST00000605085 799 ntBASIC28.25■■■□□ 2.11
TRIM60Q495X7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRIM60Q495X7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TRIM60Q495X7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TRIM60Q495X7 AC007029.1-201ENST00000604183 313 ntBASIC28.23■■■□□ 2.11
TRIM60Q495X7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRIM60Q495X7 AC009831.1-201ENST00000580420 1582 ntBASIC28.21■■■□□ 2.11
TRIM60Q495X7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TRIM60Q495X7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TRIM60Q495X7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRIM60Q495X7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRIM60Q495X7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.21■■■□□ 2.11
TRIM60Q495X7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.2■■■□□ 2.11
TRIM60Q495X7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TRIM60Q495X7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
TRIM60Q495X7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRIM60Q495X7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC28.19■■■□□ 2.1
TRIM60Q495X7 AC133552.2-201ENST00000619106 1032 ntBASIC28.19■■■□□ 2.1
TRIM60Q495X7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRIM60Q495X7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.18■■■□□ 2.1
TRIM60Q495X7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
TRIM60Q495X7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TRIM60Q495X7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
TRIM60Q495X7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.16■■■□□ 2.1
TRIM60Q495X7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC28.15■■■□□ 2.1
TRIM60Q495X7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM60Q495X7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM60Q495X7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM60Q495X7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms