Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
RFX7Q2KHR2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.06■■■□□ 2.56
RFX7Q2KHR2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.06■■■□□ 2.56
RFX7Q2KHR2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
RFX7Q2KHR2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
RFX7Q2KHR2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
RFX7Q2KHR2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.05■■■□□ 2.56
RFX7Q2KHR2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
RFX7Q2KHR2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
RFX7Q2KHR2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
RFX7Q2KHR2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
RFX7Q2KHR2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RFX7Q2KHR2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RFX7Q2KHR2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
RFX7Q2KHR2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.03■■■□□ 2.56
RFX7Q2KHR2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
RFX7Q2KHR2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.03■■■□□ 2.56
RFX7Q2KHR2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.02■■■□□ 2.56
RFX7Q2KHR2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
RFX7Q2KHR2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
RFX7Q2KHR2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.01■■■□□ 2.55
RFX7Q2KHR2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.01■■■□□ 2.55
RFX7Q2KHR2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
RFX7Q2KHR2 ABHD17AP3-201ENST00000503096 1137 ntBASIC31■■■□□ 2.55
RFX7Q2KHR2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31■■■□□ 2.55
RFX7Q2KHR2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
RFX7Q2KHR2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RFX7Q2KHR2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RFX7Q2KHR2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RFX7Q2KHR2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RFX7Q2KHR2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.99■■■□□ 2.55
RFX7Q2KHR2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.99■■■□□ 2.55
RFX7Q2KHR2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.99■■■□□ 2.55
RFX7Q2KHR2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.98■■■□□ 2.55
RFX7Q2KHR2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
RFX7Q2KHR2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.96■■■□□ 2.55
RFX7Q2KHR2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
RFX7Q2KHR2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.96■■■□□ 2.55
RFX7Q2KHR2 DRD5P2-201ENST00000421395 2012 ntBASIC30.96■■■□□ 2.55
RFX7Q2KHR2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
RFX7Q2KHR2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
RFX7Q2KHR2 AC100797.4-201ENST00000631653 1827 ntBASIC30.95■■■□□ 2.55
RFX7Q2KHR2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.95■■■□□ 2.55
RFX7Q2KHR2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
RFX7Q2KHR2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
RFX7Q2KHR2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
RFX7Q2KHR2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.94■■■□□ 2.54
RFX7Q2KHR2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
RFX7Q2KHR2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.93■■■□□ 2.54
RFX7Q2KHR2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.93■■■□□ 2.54
RFX7Q2KHR2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
RFX7Q2KHR2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
RFX7Q2KHR2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
RFX7Q2KHR2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.92■■■□□ 2.54
RFX7Q2KHR2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
RFX7Q2KHR2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
RFX7Q2KHR2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
RFX7Q2KHR2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
RFX7Q2KHR2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
RFX7Q2KHR2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
RFX7Q2KHR2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
RFX7Q2KHR2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.92■■■□□ 2.54
RFX7Q2KHR2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.91■■■□□ 2.54
RFX7Q2KHR2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
RFX7Q2KHR2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
RFX7Q2KHR2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
RFX7Q2KHR2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.91■■■□□ 2.54
RFX7Q2KHR2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.91■■■□□ 2.54
RFX7Q2KHR2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.9■■■□□ 2.54
RFX7Q2KHR2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
RFX7Q2KHR2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.9■■■□□ 2.54
RFX7Q2KHR2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.9■■■□□ 2.54
RFX7Q2KHR2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.9■■■□□ 2.54
RFX7Q2KHR2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
RFX7Q2KHR2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
RFX7Q2KHR2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
RFX7Q2KHR2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
RFX7Q2KHR2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
RFX7Q2KHR2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
RFX7Q2KHR2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.87■■■□□ 2.53
RFX7Q2KHR2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
RFX7Q2KHR2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.87■■■□□ 2.53
RFX7Q2KHR2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
RFX7Q2KHR2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
RFX7Q2KHR2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
RFX7Q2KHR2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
RFX7Q2KHR2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.84■■■□□ 2.53
RFX7Q2KHR2 AC142086.6-201ENST00000621154 1765 ntBASIC30.84■■■□□ 2.53
RFX7Q2KHR2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
RFX7Q2KHR2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
RFX7Q2KHR2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
RFX7Q2KHR2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.82■■■□□ 2.52
RFX7Q2KHR2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.82■■■□□ 2.52
RFX7Q2KHR2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
RFX7Q2KHR2 AP002414.2-202ENST00000590929 1450 ntBASIC30.82■■■□□ 2.52
RFX7Q2KHR2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.81■■■□□ 2.52
RFX7Q2KHR2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
RFX7Q2KHR2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
RFX7Q2KHR2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RFX7Q2KHR2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.8■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms