Protein–RNA interactions for Protein: Q04121

NHX1, Endosomal/prevacuolar sodium/hydrogen exchanger, yeastyeast

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NHX1Q04121 YNL140CYNL140C 570 nt7.87□□□□□ -1.15
NHX1Q04121 snR4snR4 186 nt7.87□□□□□ -1.15
NHX1Q04121 HDA1YNL021W 2121 nt7.87□□□□□ -1.15
NHX1Q04121 RTG2YGL252C 1767 nt7.87□□□□□ -1.15
NHX1Q04121 EEB1YPL095C 1371 nt7.86□□□□□ -1.15
NHX1Q04121 RIB1YBL033C 1038 nt7.86□□□□□ -1.15
NHX1Q04121 MRN1YPL184C 1839 nt7.86□□□□□ -1.15
NHX1Q04121 YPR084WYPR084W 1371 nt7.85□□□□□ -1.15
NHX1Q04121 SOD2YHR008C 702 nt7.85□□□□□ -1.15
NHX1Q04121 INM1YHR046C 888 nt7.85□□□□□ -1.15
NHX1Q04121 WSC3YOL105C 1671 nt7.85□□□□□ -1.15
NHX1Q04121 UTR5YEL035C 501 nt7.84□□□□□ -1.15
NHX1Q04121 YMR206WYMR206W 942 nt7.84□□□□□ -1.15
NHX1Q04121 YPL277CYPL277C 1464 nt7.83□□□□□ -1.16
NHX1Q04121 YGR137WYGR137W 375 nt7.83□□□□□ -1.16
NHX1Q04121 MFT1YML062C 1179 nt7.83□□□□□ -1.16
NHX1Q04121 MDL2YPL270W 2322 nt7.83□□□□□ -1.16
NHX1Q04121 WSC4YHL028W 1818 nt7.82□□□□□ -1.16
NHX1Q04121 ALG7YBR243C 1347 nt7.82□□□□□ -1.16
NHX1Q04121 SNU66YOR308C 1764 nt7.82□□□□□ -1.16
NHX1Q04121 ARO3YDR035W 1113 nt7.82□□□□□ -1.16
NHX1Q04121 MRP7YNL005C 1116 nt7.82□□□□□ -1.16
NHX1Q04121 PRE10YOR362C 867 nt7.82□□□□□ -1.16
NHX1Q04121 TIM50YPL063W 1431 nt7.82□□□□□ -1.16
NHX1Q04121 ATP2YJR121W 1536 nt7.81□□□□□ -1.16
NHX1Q04121 JHD1YER051W 1479 nt7.81□□□□□ -1.16
NHX1Q04121 DIA4YHR011W 1341 nt7.8□□□□□ -1.16
NHX1Q04121 YHR131CYHR131C 2553 nt7.8□□□□□ -1.16
NHX1Q04121 ADE2YOR128C 1716 nt7.8□□□□□ -1.16
NHX1Q04121 PAM17YKR065C 594 nt7.79□□□□□ -1.16
NHX1Q04121 ERG6YML008C 1152 nt7.79□□□□□ -1.16
NHX1Q04121 PMU1YKL128C 888 nt7.78□□□□□ -1.16
NHX1Q04121 YKR023WYKR023W 1593 nt7.78□□□□□ -1.16
NHX1Q04121 ADA2YDR448W 1305 nt7.78□□□□□ -1.16
NHX1Q04121 SNP1YIL061C 903 nt7.76□□□□□ -1.17
NHX1Q04121 KTR4YBR199W 1395 nt7.75□□□□□ -1.17
NHX1Q04121 MAK32YCR019W 1092 nt7.75□□□□□ -1.17
NHX1Q04121 YIL168WYIL168W 384 nt7.75□□□□□ -1.17
NHX1Q04121 DUS3YLR401C 2007 nt7.74□□□□□ -1.17
NHX1Q04121 GRH1YDR517W 1119 nt7.74□□□□□ -1.17
NHX1Q04121 ARG7YMR062C 1326 nt7.74□□□□□ -1.17
NHX1Q04121 ADE16YLR028C 1776 nt7.72□□□□□ -1.17
NHX1Q04121 TDH1YJL052W 999 nt7.72□□□□□ -1.17
NHX1Q04121 PZF1YPR186C 1290 nt7.72□□□□□ -1.17
NHX1Q04121 ELP4YPL101W 1371 nt7.71□□□□□ -1.17
NHX1Q04121 MTC6YHR151C 1581 nt7.71□□□□□ -1.17
NHX1Q04121 ELP6YMR312W 822 nt7.71□□□□□ -1.18
NHX1Q04121 YER152W-AYER152W-A 567 nt7.7□□□□□ -1.18
NHX1Q04121 GCD11YER025W 1584 nt7.7□□□□□ -1.18
NHX1Q04121 POP2YNR052C 1302 nt7.7□□□□□ -1.18
NHX1Q04121 GDH1YOR375C 1365 nt7.7□□□□□ -1.18
NHX1Q04121 MRP1YDR347W 966 nt7.69□□□□□ -1.18
NHX1Q04121 RPL2AYFR031C-A 765 nt7.69□□□□□ -1.18
NHX1Q04121 TAD2YJL035C 753 nt7.69□□□□□ -1.18
NHX1Q04121 MNN9YPL050C 1188 nt7.69□□□□□ -1.18
NHX1Q04121 HMT1YBR034C 1047 nt7.68□□□□□ -1.18
NHX1Q04121 FIT1YDR534C 1587 nt7.67□□□□□ -1.18
NHX1Q04121 ALR1YOL130W 2580 nt7.66□□□□□ -1.18
NHX1Q04121 DST1YGL043W 930 nt7.66□□□□□ -1.18
NHX1Q04121 APT1YML022W 564 nt7.66□□□□□ -1.18
NHX1Q04121 UFD1YGR048W 1086 nt7.65□□□□□ -1.18
NHX1Q04121 CDA1YLR307W 906 nt7.65□□□□□ -1.18
NHX1Q04121 MAM3YOL060C 2121 nt7.65□□□□□ -1.18
NHX1Q04121 MDH2YOL126C 1134 nt7.65□□□□□ -1.18
NHX1Q04121 TPO1YLL028W 1761 nt7.64□□□□□ -1.19
NHX1Q04121 EHD3YDR036C 1503 nt7.64□□□□□ -1.19
NHX1Q04121 NPL6YMR091C 1308 nt7.64□□□□□ -1.19
NHX1Q04121 AOS1YPR180W 1044 nt7.64□□□□□ -1.19
NHX1Q04121 HRA1HRA1 564 nt7.63□□□□□ -1.19
NHX1Q04121 TES1YJR019C 1050 nt7.63□□□□□ -1.19
NHX1Q04121 HAM1YJR069C 594 nt7.63□□□□□ -1.19
NHX1Q04121 MET13YGL125W 1803 nt7.63□□□□□ -1.19
NHX1Q04121 CPR2YHR057C 618 nt7.62□□□□□ -1.19
NHX1Q04121 ADE1YAR015W 921 nt7.62□□□□□ -1.19
NHX1Q04121 NUP53YMR153W 1428 nt7.61□□□□□ -1.19
NHX1Q04121 PSP2YML017W 1782 nt7.61□□□□□ -1.19
NHX1Q04121 PMT1YDL095W 2454 nt7.61□□□□□ -1.19
NHX1Q04121 tL(UAA)B1tL(UAA)B1 84 nt7.61□□□□□ -1.19
NHX1Q04121 tL(UAA)B2tL(UAA)B2 84 nt7.61□□□□□ -1.19
NHX1Q04121 tL(UAA)DtL(UAA)D 84 nt7.61□□□□□ -1.19
NHX1Q04121 SUP51tL(UAA)J 84 nt7.61□□□□□ -1.19
NHX1Q04121 tL(UAA)KtL(UAA)K 84 nt7.61□□□□□ -1.19
NHX1Q04121 tL(UAA)LtL(UAA)L 84 nt7.61□□□□□ -1.19
NHX1Q04121 tL(UAA)NtL(UAA)N 84 nt7.61□□□□□ -1.19
NHX1Q04121 AVL9YLR114C 2295 nt7.61□□□□□ -1.19
NHX1Q04121 PFS2YNL317W 1398 nt7.6□□□□□ -1.19
NHX1Q04121 CKB1YGL019W 837 nt7.6□□□□□ -1.19
NHX1Q04121 COX16YJL003W 357 nt7.6□□□□□ -1.19
NHX1Q04121 YOR343CYOR343C 327 nt7.6□□□□□ -1.19
NHX1Q04121 HSV2YGR223C 1347 nt7.59□□□□□ -1.19
NHX1Q04121 PMT7YDR307W 1989 nt7.59□□□□□ -1.19
NHX1Q04121 LPD1YFL018C 1500 nt7.58□□□□□ -1.2
NHX1Q04121 SPR1YOR190W 1338 nt7.58□□□□□ -1.2
NHX1Q04121 YCR049CYCR049C 447 nt7.58□□□□□ -1.2
NHX1Q04121 HAC1YFL031W 717 nt7.58□□□□□ -1.2
NHX1Q04121 BUD20YLR074C 501 nt7.58□□□□□ -1.2
NHX1Q04121 TOS1YBR162C 1368 nt7.58□□□□□ -1.2
NHX1Q04121 PNS1YOR161C 1620 nt7.57□□□□□ -1.2
NHX1Q04121 STE3YKL178C 1413 nt7.57□□□□□ -1.2
NHX1Q04121 YEL023CYEL023C 2049 nt7.57□□□□□ -1.2
Retrieved 100 of 7,029 protein–RNA pairs in 14.8 ms