Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CFHR3Q02985 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.94■□□□□ 0.78
CFHR3Q02985 MIR4449-201ENST00000578365 66 ntBASIC19.94■□□□□ 0.78
CFHR3Q02985 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CFHR3Q02985 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CFHR3Q02985 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.93■□□□□ 0.78
CFHR3Q02985 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CFHR3Q02985 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CFHR3Q02985 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.92■□□□□ 0.78
CFHR3Q02985 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CFHR3Q02985 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CFHR3Q02985 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CFHR3Q02985 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CFHR3Q02985 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.91■□□□□ 0.78
CFHR3Q02985 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CFHR3Q02985 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CFHR3Q02985 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CFHR3Q02985 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.9■□□□□ 0.78
CFHR3Q02985 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CFHR3Q02985 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CFHR3Q02985 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CFHR3Q02985 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CFHR3Q02985 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CFHR3Q02985 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.9■□□□□ 0.78
CFHR3Q02985 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CFHR3Q02985 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CFHR3Q02985 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CFHR3Q02985 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CFHR3Q02985 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CFHR3Q02985 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CFHR3Q02985 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.89■□□□□ 0.77
CFHR3Q02985 AC008813.1-201ENST00000536597 885 ntBASIC19.89■□□□□ 0.77
CFHR3Q02985 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CFHR3Q02985 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.88■□□□□ 0.77
CFHR3Q02985 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CFHR3Q02985 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CFHR3Q02985 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CFHR3Q02985 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CFHR3Q02985 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CFHR3Q02985 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.87■□□□□ 0.77
CFHR3Q02985 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.87■□□□□ 0.77
CFHR3Q02985 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CFHR3Q02985 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.86■□□□□ 0.77
CFHR3Q02985 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CFHR3Q02985 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CFHR3Q02985 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.86■□□□□ 0.77
CFHR3Q02985 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.86■□□□□ 0.77
CFHR3Q02985 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CFHR3Q02985 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CFHR3Q02985 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CFHR3Q02985 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CFHR3Q02985 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CFHR3Q02985 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CFHR3Q02985 AC139426.1-201ENST00000568218 2529 ntBASIC19.85■□□□□ 0.77
CFHR3Q02985 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
CFHR3Q02985 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CFHR3Q02985 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.84■□□□□ 0.77
CFHR3Q02985 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CFHR3Q02985 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CFHR3Q02985 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CFHR3Q02985 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.83■□□□□ 0.77
CFHR3Q02985 AP002414.2-202ENST00000590929 1450 ntBASIC19.83■□□□□ 0.76
CFHR3Q02985 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
CFHR3Q02985 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CFHR3Q02985 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.82■□□□□ 0.76
CFHR3Q02985 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CFHR3Q02985 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CFHR3Q02985 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CFHR3Q02985 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CFHR3Q02985 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CFHR3Q02985 AC148477.6-201ENST00000623746 465 ntBASIC19.81■□□□□ 0.76
CFHR3Q02985 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CFHR3Q02985 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CFHR3Q02985 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CFHR3Q02985 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CFHR3Q02985 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CFHR3Q02985 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CFHR3Q02985 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CFHR3Q02985 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CFHR3Q02985 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CFHR3Q02985 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CFHR3Q02985 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
CFHR3Q02985 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CFHR3Q02985 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CFHR3Q02985 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CFHR3Q02985 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CFHR3Q02985 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.78■□□□□ 0.76
CFHR3Q02985 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
CFHR3Q02985 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CFHR3Q02985 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CFHR3Q02985 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CFHR3Q02985 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CFHR3Q02985 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CFHR3Q02985 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CFHR3Q02985 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CFHR3Q02985 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CFHR3Q02985 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CFHR3Q02985 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CFHR3Q02985 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
CFHR3Q02985 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms