Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
ERVFC1-1P60608 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.52■□□□□ 0.72
ERVFC1-1P60608 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ERVFC1-1P60608 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.52■□□□□ 0.71
ERVFC1-1P60608 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.52■□□□□ 0.71
ERVFC1-1P60608 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
ERVFC1-1P60608 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.52■□□□□ 0.71
ERVFC1-1P60608 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ERVFC1-1P60608 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERVFC1-1P60608 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ERVFC1-1P60608 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.51■□□□□ 0.71
ERVFC1-1P60608 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ERVFC1-1P60608 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ERVFC1-1P60608 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ERVFC1-1P60608 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.5■□□□□ 0.71
ERVFC1-1P60608 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ERVFC1-1P60608 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
ERVFC1-1P60608 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERVFC1-1P60608 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERVFC1-1P60608 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.49■□□□□ 0.71
ERVFC1-1P60608 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ERVFC1-1P60608 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.49■□□□□ 0.71
ERVFC1-1P60608 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.49■□□□□ 0.71
ERVFC1-1P60608 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERVFC1-1P60608 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERVFC1-1P60608 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.48■□□□□ 0.71
ERVFC1-1P60608 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.48■□□□□ 0.71
ERVFC1-1P60608 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ERVFC1-1P60608 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ERVFC1-1P60608 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.47■□□□□ 0.71
ERVFC1-1P60608 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ERVFC1-1P60608 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.47■□□□□ 0.71
ERVFC1-1P60608 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
ERVFC1-1P60608 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ERVFC1-1P60608 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ERVFC1-1P60608 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ERVFC1-1P60608 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ERVFC1-1P60608 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ERVFC1-1P60608 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ERVFC1-1P60608 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ERVFC1-1P60608 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ERVFC1-1P60608 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ERVFC1-1P60608 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.45■□□□□ 0.7
ERVFC1-1P60608 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.45■□□□□ 0.7
ERVFC1-1P60608 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ERVFC1-1P60608 LINC01003-201ENST00000564834 1764 ntBASIC19.44■□□□□ 0.7
ERVFC1-1P60608 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ERVFC1-1P60608 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.44■□□□□ 0.7
ERVFC1-1P60608 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERVFC1-1P60608 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ERVFC1-1P60608 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
ERVFC1-1P60608 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
ERVFC1-1P60608 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERVFC1-1P60608 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERVFC1-1P60608 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERVFC1-1P60608 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ERVFC1-1P60608 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.42■□□□□ 0.7
ERVFC1-1P60608 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.41■□□□□ 0.7
ERVFC1-1P60608 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ERVFC1-1P60608 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.41■□□□□ 0.7
ERVFC1-1P60608 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ERVFC1-1P60608 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ERVFC1-1P60608 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ERVFC1-1P60608 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.4■□□□□ 0.7
ERVFC1-1P60608 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ERVFC1-1P60608 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
ERVFC1-1P60608 AC091060.1-201ENST00000623524 1766 ntBASIC19.39■□□□□ 0.7
ERVFC1-1P60608 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.39■□□□□ 0.7
ERVFC1-1P60608 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.39■□□□□ 0.69
ERVFC1-1P60608 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
ERVFC1-1P60608 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ERVFC1-1P60608 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ERVFC1-1P60608 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ERVFC1-1P60608 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ERVFC1-1P60608 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.38■□□□□ 0.69
ERVFC1-1P60608 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ERVFC1-1P60608 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.38■□□□□ 0.69
ERVFC1-1P60608 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ERVFC1-1P60608 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERVFC1-1P60608 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERVFC1-1P60608 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.36■□□□□ 0.69
ERVFC1-1P60608 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ERVFC1-1P60608 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
ERVFC1-1P60608 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.36■□□□□ 0.69
ERVFC1-1P60608 AC020928.2-201ENST00000588717 2197 ntBASIC19.36■□□□□ 0.69
ERVFC1-1P60608 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ERVFC1-1P60608 AC093323.1-202ENST00000635031 2045 ntBASIC19.35■□□□□ 0.69
ERVFC1-1P60608 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERVFC1-1P60608 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ERVFC1-1P60608 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERVFC1-1P60608 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERVFC1-1P60608 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.35■□□□□ 0.69
ERVFC1-1P60608 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ERVFC1-1P60608 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ERVFC1-1P60608 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ERVFC1-1P60608 AC010864.1-201ENST00000609407 1511 ntBASIC19.35■□□□□ 0.69
ERVFC1-1P60608 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
ERVFC1-1P60608 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ERVFC1-1P60608 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ERVFC1-1P60608 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms