Protein–RNA interactions for Protein: P56557

TMEM50B, Transmembrane protein 50B, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50BP56557 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM50BP56557 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.54■■□□□ 1.04
TMEM50BP56557 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM50BP56557 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM50BP56557 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM50BP56557 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.52■■□□□ 1.04
TMEM50BP56557 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM50BP56557 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.51■■□□□ 1.03
TMEM50BP56557 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM50BP56557 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM50BP56557 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM50BP56557 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM50BP56557 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TMEM50BP56557 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM50BP56557 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.5■■□□□ 1.03
TMEM50BP56557 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM50BP56557 AC097358.2-201ENST00000607541 1159 ntBASIC21.5■■□□□ 1.03
TMEM50BP56557 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TMEM50BP56557 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.5■■□□□ 1.03
TMEM50BP56557 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM50BP56557 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
TMEM50BP56557 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.49■■□□□ 1.03
TMEM50BP56557 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM50BP56557 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TMEM50BP56557 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM50BP56557 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.48■■□□□ 1.03
TMEM50BP56557 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.48■■□□□ 1.03
TMEM50BP56557 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM50BP56557 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM50BP56557 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.47■■□□□ 1.03
TMEM50BP56557 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM50BP56557 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM50BP56557 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM50BP56557 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.46■■□□□ 1.03
TMEM50BP56557 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.46■■□□□ 1.03
TMEM50BP56557 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TMEM50BP56557 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.45■■□□□ 1.02
TMEM50BP56557 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM50BP56557 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM50BP56557 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM50BP56557 MIR762-201ENST00000390236 83 ntBASIC21.44■■□□□ 1.02
TMEM50BP56557 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM50BP56557 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TMEM50BP56557 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM50BP56557 AL449106.1-201ENST00000608517 1980 ntBASIC21.43■■□□□ 1.02
TMEM50BP56557 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM50BP56557 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.43■■□□□ 1.02
TMEM50BP56557 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM50BP56557 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM50BP56557 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM50BP56557 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.42■■□□□ 1.02
TMEM50BP56557 AC135731.1-201ENST00000569415 2548 ntBASIC21.42■■□□□ 1.02
TMEM50BP56557 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM50BP56557 AC135983.2-203ENST00000454486 1613 ntBASIC21.4■■□□□ 1.02
TMEM50BP56557 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
TMEM50BP56557 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.4■■□□□ 1.02
TMEM50BP56557 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
TMEM50BP56557 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.4■■□□□ 1.02
TMEM50BP56557 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TMEM50BP56557 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.39■■□□□ 1.02
TMEM50BP56557 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TMEM50BP56557 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM50BP56557 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.39■■□□□ 1.01
TMEM50BP56557 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
TMEM50BP56557 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM50BP56557 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.39■■□□□ 1.01
TMEM50BP56557 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.39■■□□□ 1.01
TMEM50BP56557 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM50BP56557 AC018358.1-201ENST00000631079 1402 ntBASIC21.38■■□□□ 1.01
TMEM50BP56557 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
TMEM50BP56557 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM50BP56557 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.38■■□□□ 1.01
TMEM50BP56557 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
TMEM50BP56557 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM50BP56557 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM50BP56557 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
TMEM50BP56557 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM50BP56557 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM50BP56557 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TMEM50BP56557 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM50BP56557 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TMEM50BP56557 AC091060.1-201ENST00000623524 1766 ntBASIC21.36■■□□□ 1.01
TMEM50BP56557 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM50BP56557 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM50BP56557 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TMEM50BP56557 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.36■■□□□ 1.01
TMEM50BP56557 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM50BP56557 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TMEM50BP56557 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.35■■□□□ 1.01
TMEM50BP56557 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM50BP56557 WHAMMP2-203ENST00000563942 1603 ntBASIC21.35■■□□□ 1.01
TMEM50BP56557 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.35■■□□□ 1.01
TMEM50BP56557 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM50BP56557 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM50BP56557 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM50BP56557 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.34■■□□□ 1.01
TMEM50BP56557 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.34■■□□□ 1.01
TMEM50BP56557 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.34■■□□□ 1.01
TMEM50BP56557 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM50BP56557 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms