Protein–RNA interactions for Protein: P52917

VPS4, Vacuolar protein sorting-associated protein 4, yeastyeast

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS4P52917 NME1NME1 340 nt9.08□□□□□ -0.96
VPS4P52917 SPR1YOR190W 1338 nt9.07□□□□□ -0.96
VPS4P52917 CCR4YAL021C 2514 nt9.07□□□□□ -0.96
VPS4P52917 GGA2YHR108W 1758 nt9.07□□□□□ -0.96
VPS4P52917 GGC1YDL198C 903 nt9.07□□□□□ -0.96
VPS4P52917 YIR035CYIR035C 765 nt9.07□□□□□ -0.96
VPS4P52917 PMU1YKL128C 888 nt9.07□□□□□ -0.96
VPS4P52917 THI73YLR004C 1572 nt9.07□□□□□ -0.96
VPS4P52917 PUS4YNL292W 1212 nt9.06□□□□□ -0.96
VPS4P52917 TIM50YPL063W 1431 nt9.05□□□□□ -0.96
VPS4P52917 YDR510C-AYDR510C-A 117 nt9.05□□□□□ -0.96
VPS4P52917 CTF3YLR381W 2202 nt9.04□□□□□ -0.96
VPS4P52917 UME1YPL139C 1383 nt9.04□□□□□ -0.96
VPS4P52917 POR2YIL114C 846 nt9.02□□□□□ -0.97
VPS4P52917 AIM34YMR003W 597 nt9.01□□□□□ -0.97
VPS4P52917 MCM5YLR274W 2328 nt9□□□□□ -0.97
VPS4P52917 APT1YML022W 564 nt9□□□□□ -0.97
VPS4P52917 CRN1YLR429W 1956 nt9□□□□□ -0.97
VPS4P52917 MCP1YOR228C 909 nt8.99□□□□□ -0.97
VPS4P52917 YBL111CYBL111C 2004 nt8.98□□□□□ -0.97
VPS4P52917 TMS1YDR105C 1422 nt8.98□□□□□ -0.97
VPS4P52917 BUB2YMR055C 921 nt8.98□□□□□ -0.97
VPS4P52917 CYS3YAL012W 1185 nt8.97□□□□□ -0.97
VPS4P52917 GPM1YKL152C 744 nt8.97□□□□□ -0.97
VPS4P52917 PRE10YOR362C 867 nt8.97□□□□□ -0.97
VPS4P52917 AAC3YBR085W 924 nt8.97□□□□□ -0.97
VPS4P52917 MEP1YGR121C 1479 nt8.96□□□□□ -0.97
VPS4P52917 CHA1YCL064C 1083 nt8.96□□□□□ -0.98
VPS4P52917 FET5YFL041W 1869 nt8.96□□□□□ -0.98
VPS4P52917 snR4snR4 186 nt8.95□□□□□ -0.98
VPS4P52917 YPQ1YOL092W 927 nt8.94□□□□□ -0.98
VPS4P52917 HXT8YJL214W 1710 nt8.94□□□□□ -0.98
VPS4P52917 AFG2YLR397C 2343 nt8.93□□□□□ -0.98
VPS4P52917 PTH2YBL057C 627 nt8.93□□□□□ -0.98
VPS4P52917 ADE16YLR028C 1776 nt8.93□□□□□ -0.98
VPS4P52917 LEU4YNL104C 1860 nt8.93□□□□□ -0.98
VPS4P52917 YIL108WYIL108W 2091 nt8.92□□□□□ -0.98
VPS4P52917 ADH6YMR318C 1083 nt8.92□□□□□ -0.98
VPS4P52917 YBR056WYBR056W 1506 nt8.91□□□□□ -0.98
VPS4P52917 ZIM17YNL310C 525 nt8.91□□□□□ -0.98
VPS4P52917 PFS2YNL317W 1398 nt8.9□□□□□ -0.98
VPS4P52917 HSV2YGR223C 1347 nt8.9□□□□□ -0.98
VPS4P52917 AAD14YNL331C 1131 nt8.9□□□□□ -0.98
VPS4P52917 TOP3YLR234W 1971 nt8.9□□□□□ -0.99
VPS4P52917 PMP3YDR276C 168 nt8.89□□□□□ -0.99
VPS4P52917 YDR467CYDR467C 327 nt8.89□□□□□ -0.99
VPS4P52917 GAL83YER027C 1254 nt8.89□□□□□ -0.99
VPS4P52917 MBF1YOR298C-A 456 nt8.89□□□□□ -0.99
VPS4P52917 AIM46YHR199C 933 nt8.87□□□□□ -0.99
VPS4P52917 ORT1YOR130C 879 nt8.87□□□□□ -0.99
VPS4P52917 tE(CUC)DtE(CUC)D 72 nt8.86□□□□□ -0.99
VPS4P52917 tE(CUC)ItE(CUC)I 72 nt8.86□□□□□ -0.99
VPS4P52917 NMA2YGR010W 1188 nt8.86□□□□□ -0.99
VPS4P52917 CST26YBR042C 1194 nt8.86□□□□□ -0.99
VPS4P52917 CKI1YLR133W 1749 nt8.85□□□□□ -0.99
VPS4P52917 YPL067CYPL067C 597 nt8.85□□□□□ -0.99
VPS4P52917 SPE3YPR069C 882 nt8.85□□□□□ -0.99
VPS4P52917 ITR1YDR497C 1755 nt8.85□□□□□ -0.99
VPS4P52917 YEL023CYEL023C 2049 nt8.85□□□□□ -0.99
VPS4P52917 MSI1YBR195C 1269 nt8.84□□□□□ -0.99
VPS4P52917 LRO1YNR008W 1986 nt8.84□□□□□ -0.99
VPS4P52917 YJR142WYJR142W 1029 nt8.83□□□□□ -1
VPS4P52917 LGE1YPL055C 999 nt8.83□□□□□ -1
VPS4P52917 ERV2YPR037C 591 nt8.83□□□□□ -1
VPS4P52917 YMC2YBR104W 990 nt8.83□□□□□ -1
VPS4P52917 EHT1YBR177C 1356 nt8.83□□□□□ -1
VPS4P52917 PLB3YOL011W 2061 nt8.82□□□□□ -1
VPS4P52917 ATP10YLR393W 840 nt8.82□□□□□ -1
VPS4P52917 ATO2YNR002C 849 nt8.82□□□□□ -1
VPS4P52917 MPH3YJR160C 1809 nt8.82□□□□□ -1
VPS4P52917 GNP1YDR508C 1992 nt8.81□□□□□ -1
VPS4P52917 MRS4YKR052C 915 nt8.81□□□□□ -1
VPS4P52917 YMR074CYMR074C 438 nt8.81□□□□□ -1
VPS4P52917 INH1YDL181W 258 nt8.8□□□□□ -1
VPS4P52917 YJL009WYJL009W 327 nt8.8□□□□□ -1
VPS4P52917 PRC1YMR297W 1599 nt8.8□□□□□ -1
VPS4P52917 MSB3YNL293W 1902 nt8.8□□□□□ -1
VPS4P52917 ARG7YMR062C 1326 nt8.8□□□□□ -1
VPS4P52917 NPP2YEL016C 1482 nt8.77□□□□□ -1
VPS4P52917 YNL040WYNL040W 1371 nt8.77□□□□□ -1.01
VPS4P52917 HXT13YEL069C 1695 nt8.76□□□□□ -1.01
VPS4P52917 AVO2YMR068W 1281 nt8.76□□□□□ -1.01
VPS4P52917 CDC3YLR314C 1563 nt8.75□□□□□ -1.01
VPS4P52917 BIO3YNR058W 1443 nt8.75□□□□□ -1.01
VPS4P52917 YGL081WYGL081W 963 nt8.75□□□□□ -1.01
VPS4P52917 RCF1YML030W 480 nt8.75□□□□□ -1.01
VPS4P52917 TRR2YHR106W 1029 nt8.74□□□□□ -1.01
VPS4P52917 STS1YIR011C 960 nt8.74□□□□□ -1.01
VPS4P52917 PRS4YBL068W 981 nt8.74□□□□□ -1.01
VPS4P52917 TES1YJR019C 1050 nt8.73□□□□□ -1.01
VPS4P52917 YMR253CYMR253C 1245 nt8.73□□□□□ -1.01
VPS4P52917 YRF1-2YER190W 5046 nt8.73□□□□□ -1.01
VPS4P52917 STF1YDL130W-A 261 nt8.72□□□□□ -1.01
VPS4P52917 YLR184WYLR184W 348 nt8.72□□□□□ -1.01
VPS4P52917 YER152CYER152C 1332 nt8.72□□□□□ -1.01
VPS4P52917 RRP43YCR035C 1185 nt8.71□□□□□ -1.02
VPS4P52917 ARO3YDR035W 1113 nt8.71□□□□□ -1.02
VPS4P52917 HRB1YNL004W 1365 nt8.71□□□□□ -1.02
VPS4P52917 GUT1YHL032C 2130 nt8.7□□□□□ -1.02
VPS4P52917 SPE4YLR146C 903 nt8.7□□□□□ -1.02
Retrieved 100 of 7,029 protein–RNA pairs in 201.4 ms