Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CLCNKAP51800 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
CLCNKAP51800 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
CLCNKAP51800 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.98■■□□□ 1.59
CLCNKAP51800 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.98■■□□□ 1.59
CLCNKAP51800 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CLCNKAP51800 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CLCNKAP51800 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.97■■□□□ 1.59
CLCNKAP51800 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.97■■□□□ 1.59
CLCNKAP51800 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CLCNKAP51800 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.97■■□□□ 1.59
CLCNKAP51800 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CLCNKAP51800 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.96■■□□□ 1.59
CLCNKAP51800 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.96■■□□□ 1.59
CLCNKAP51800 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
CLCNKAP51800 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
CLCNKAP51800 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.95■■□□□ 1.58
CLCNKAP51800 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CLCNKAP51800 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CLCNKAP51800 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.94■■□□□ 1.58
CLCNKAP51800 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
CLCNKAP51800 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
CLCNKAP51800 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.94■■□□□ 1.58
CLCNKAP51800 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.94■■□□□ 1.58
CLCNKAP51800 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CLCNKAP51800 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CLCNKAP51800 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CLCNKAP51800 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.93■■□□□ 1.58
CLCNKAP51800 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
CLCNKAP51800 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CLCNKAP51800 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CLCNKAP51800 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.91■■□□□ 1.58
CLCNKAP51800 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CLCNKAP51800 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
CLCNKAP51800 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
CLCNKAP51800 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
CLCNKAP51800 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.91■■□□□ 1.58
CLCNKAP51800 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CLCNKAP51800 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
CLCNKAP51800 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CLCNKAP51800 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
CLCNKAP51800 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CLCNKAP51800 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CLCNKAP51800 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CLCNKAP51800 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.9■■□□□ 1.58
CLCNKAP51800 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CLCNKAP51800 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CLCNKAP51800 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CLCNKAP51800 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CLCNKAP51800 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CLCNKAP51800 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CLCNKAP51800 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
CLCNKAP51800 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.9■■□□□ 1.58
CLCNKAP51800 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.89■■□□□ 1.58
CLCNKAP51800 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CLCNKAP51800 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CLCNKAP51800 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CLCNKAP51800 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CLCNKAP51800 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.87■■□□□ 1.57
CLCNKAP51800 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.87■■□□□ 1.57
CLCNKAP51800 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.87■■□□□ 1.57
CLCNKAP51800 AC148477.6-201ENST00000623746 465 ntBASIC24.87■■□□□ 1.57
CLCNKAP51800 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
CLCNKAP51800 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.86■■□□□ 1.57
CLCNKAP51800 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.86■■□□□ 1.57
CLCNKAP51800 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.86■■□□□ 1.57
CLCNKAP51800 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.85■■□□□ 1.57
CLCNKAP51800 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CLCNKAP51800 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CLCNKAP51800 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
CLCNKAP51800 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CLCNKAP51800 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CLCNKAP51800 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.84■■□□□ 1.57
CLCNKAP51800 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.84■■□□□ 1.57
CLCNKAP51800 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CLCNKAP51800 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CLCNKAP51800 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CLCNKAP51800 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CLCNKAP51800 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CLCNKAP51800 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.83■■□□□ 1.57
CLCNKAP51800 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
CLCNKAP51800 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.82■■□□□ 1.56
CLCNKAP51800 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CLCNKAP51800 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CLCNKAP51800 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CLCNKAP51800 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
CLCNKAP51800 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CLCNKAP51800 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CLCNKAP51800 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CLCNKAP51800 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.79■■□□□ 1.56
CLCNKAP51800 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CLCNKAP51800 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.79■■□□□ 1.56
CLCNKAP51800 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CLCNKAP51800 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CLCNKAP51800 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.79■■□□□ 1.56
CLCNKAP51800 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CLCNKAP51800 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CLCNKAP51800 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
CLCNKAP51800 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.78■■□□□ 1.56
CLCNKAP51800 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms