Protein–RNA interactions for Protein: P49792

RANBP2, E3 SUMO-protein ligase RanBP2, humanhuman

Known RBP Predictions only

Length 3,224 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP2P49792 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
RANBP2P49792 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
RANBP2P49792 KRT8P33-201ENST00000508125 1423 ntBASIC28.21■■■□□ 2.11
RANBP2P49792 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RANBP2P49792 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RANBP2P49792 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
RANBP2P49792 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
RANBP2P49792 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
RANBP2P49792 AC025884.2-201ENST00000553429 711 ntBASIC28.2■■■□□ 2.1
RANBP2P49792 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.2■■■□□ 2.1
RANBP2P49792 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.19■■■□□ 2.1
RANBP2P49792 LSM7-203ENST00000585409 512 ntTSL 2 BASIC28.19■■■□□ 2.1
RANBP2P49792 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
RANBP2P49792 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.18■■■□□ 2.1
RANBP2P49792 AL356441.2-201ENST00000443009 864 ntBASIC28.18■■■□□ 2.1
RANBP2P49792 RP9P-202ENST00000450133 1212 ntBASIC28.18■■■□□ 2.1
RANBP2P49792 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.17■■■□□ 2.1
RANBP2P49792 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
RANBP2P49792 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RANBP2P49792 MIR219A2-201ENST00000608502 1504 ntBASIC28.16■■■□□ 2.1
RANBP2P49792 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RANBP2P49792 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
RANBP2P49792 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC28.15■■■□□ 2.1
RANBP2P49792 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC28.15■■■□□ 2.1
RANBP2P49792 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC28.14■■■□□ 2.09
RANBP2P49792 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
RANBP2P49792 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC28.13■■■□□ 2.09
RANBP2P49792 AL157400.5-201ENST00000507624 621 ntBASIC28.13■■■□□ 2.09
RANBP2P49792 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
RANBP2P49792 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
RANBP2P49792 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
RANBP2P49792 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
RANBP2P49792 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
RANBP2P49792 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC28.12■■■□□ 2.09
RANBP2P49792 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
RANBP2P49792 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
RANBP2P49792 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC28.09■■■□□ 2.09
RANBP2P49792 DUX4L9-201ENST00000449051 1259 ntBASIC28.09■■■□□ 2.09
RANBP2P49792 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.09■■■□□ 2.09
RANBP2P49792 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.09■■■□□ 2.09
RANBP2P49792 AC007029.1-201ENST00000604183 313 ntBASIC28.09■■■□□ 2.09
RANBP2P49792 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.08■■■□□ 2.09
RANBP2P49792 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
RANBP2P49792 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC28.07■■■□□ 2.08
RANBP2P49792 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
RANBP2P49792 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RANBP2P49792 AC010980.1-201ENST00000587192 1142 ntBASIC28.07■■■□□ 2.08
RANBP2P49792 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RANBP2P49792 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RANBP2P49792 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
RANBP2P49792 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.06■■■□□ 2.08
RANBP2P49792 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RANBP2P49792 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RANBP2P49792 AC009831.1-201ENST00000580420 1582 ntBASIC28.05■■■□□ 2.08
RANBP2P49792 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
RANBP2P49792 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
RANBP2P49792 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
RANBP2P49792 AC103834.1-201ENST00000520383 144 ntBASIC28.05■■■□□ 2.08
RANBP2P49792 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
RANBP2P49792 ECEL1P2-201ENST00000461596 1295 ntBASIC28.04■■■□□ 2.08
RANBP2P49792 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RANBP2P49792 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
RANBP2P49792 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC28.04■■■□□ 2.08
RANBP2P49792 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
RANBP2P49792 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
RANBP2P49792 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
RANBP2P49792 WHAMMP2-203ENST00000563942 1603 ntBASIC28.03■■■□□ 2.08
RANBP2P49792 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.03■■■□□ 2.08
RANBP2P49792 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
RANBP2P49792 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
RANBP2P49792 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
RANBP2P49792 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
RANBP2P49792 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
RANBP2P49792 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
RANBP2P49792 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
RANBP2P49792 AL592293.1-201ENST00000502889 1188 ntBASIC28■■■□□ 2.07
RANBP2P49792 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
RANBP2P49792 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC28■■■□□ 2.07
RANBP2P49792 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.99■■■□□ 2.07
RANBP2P49792 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
RANBP2P49792 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
RANBP2P49792 BEX3-202ENST00000372634 753 ntTSL 2 BASIC27.99■■■□□ 2.07
RANBP2P49792 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
RANBP2P49792 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.98■■■□□ 2.07
RANBP2P49792 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC27.98■■■□□ 2.07
RANBP2P49792 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
RANBP2P49792 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
RANBP2P49792 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
RANBP2P49792 AC133552.2-201ENST00000619106 1032 ntBASIC27.97■■■□□ 2.07
RANBP2P49792 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
RANBP2P49792 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC27.97■■■□□ 2.07
RANBP2P49792 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
RANBP2P49792 MIR638-201ENST00000385237 100 ntBASIC27.96■■■□□ 2.07
RANBP2P49792 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RANBP2P49792 AC135983.2-203ENST00000454486 1613 ntBASIC27.96■■■□□ 2.07
RANBP2P49792 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
RANBP2P49792 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
RANBP2P49792 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.07
RANBP2P49792 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
RANBP2P49792 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC27.94■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms