Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
COL15A1P39059 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC32.7■■■□□ 2.82
COL15A1P39059 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
COL15A1P39059 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
COL15A1P39059 U85056.1-201ENST00000616429 682 ntBASIC32.69■■■□□ 2.82
COL15A1P39059 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC32.68■■■□□ 2.82
COL15A1P39059 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
COL15A1P39059 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC32.67■■■□□ 2.82
COL15A1P39059 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC32.67■■■□□ 2.82
COL15A1P39059 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
COL15A1P39059 HYI-213ENST00000583037 1322 ntTSL 5 BASIC32.67■■■□□ 2.82
COL15A1P39059 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC32.66■■■□□ 2.82
COL15A1P39059 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC32.66■■■□□ 2.82
COL15A1P39059 MIR219A2-201ENST00000608502 1504 ntBASIC32.66■■■□□ 2.82
COL15A1P39059 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC32.66■■■□□ 2.82
COL15A1P39059 AC018358.1-201ENST00000631079 1402 ntBASIC32.66■■■□□ 2.82
COL15A1P39059 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
COL15A1P39059 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
COL15A1P39059 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
COL15A1P39059 PEX7-203ENST00000541292 945 ntTSL 5 BASIC32.65■■■□□ 2.82
COL15A1P39059 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
COL15A1P39059 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
COL15A1P39059 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC32.65■■■□□ 2.82
COL15A1P39059 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
COL15A1P39059 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
COL15A1P39059 ST7-AS1-201ENST00000456775 1889 ntBASIC32.64■■■□□ 2.82
COL15A1P39059 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC32.64■■■□□ 2.82
COL15A1P39059 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC32.64■■■□□ 2.82
COL15A1P39059 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC32.64■■■□□ 2.82
COL15A1P39059 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.81
COL15A1P39059 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
COL15A1P39059 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC32.63■■■□□ 2.81
COL15A1P39059 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC32.62■■■□□ 2.81
COL15A1P39059 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
COL15A1P39059 AL033527.3-201ENST00000566366 1196 ntBASIC32.62■■■□□ 2.81
COL15A1P39059 AC092296.2-201ENST00000589470 999 ntBASIC32.62■■■□□ 2.81
COL15A1P39059 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
COL15A1P39059 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC32.61■■■□□ 2.81
COL15A1P39059 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC32.61■■■□□ 2.81
COL15A1P39059 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
COL15A1P39059 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
COL15A1P39059 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
COL15A1P39059 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC32.6■■■□□ 2.81
COL15A1P39059 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
COL15A1P39059 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC32.59■■■□□ 2.81
COL15A1P39059 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC32.59■■■□□ 2.81
COL15A1P39059 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
COL15A1P39059 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
COL15A1P39059 ST7-205ENST00000393446 2114 ntTSL 5 BASIC32.59■■■□□ 2.81
COL15A1P39059 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
COL15A1P39059 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
COL15A1P39059 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC32.57■■■□□ 2.8
COL15A1P39059 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
COL15A1P39059 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC32.57■■■□□ 2.8
COL15A1P39059 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC32.57■■■□□ 2.8
COL15A1P39059 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
COL15A1P39059 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC32.56■■■□□ 2.8
COL15A1P39059 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC32.55■■■□□ 2.8
COL15A1P39059 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC32.54■■■□□ 2.8
COL15A1P39059 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
COL15A1P39059 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
COL15A1P39059 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
COL15A1P39059 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC32.53■■■□□ 2.8
COL15A1P39059 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
COL15A1P39059 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
COL15A1P39059 GFER-205ENST00000569451 517 ntTSL 5 BASIC32.52■■■□□ 2.8
COL15A1P39059 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC32.52■■■□□ 2.8
COL15A1P39059 MEST-211ENST00000437945 1455 ntTSL 5 BASIC32.52■■■□□ 2.8
COL15A1P39059 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC32.52■■■□□ 2.8
COL15A1P39059 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
COL15A1P39059 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC32.51■■■□□ 2.8
COL15A1P39059 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
COL15A1P39059 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
COL15A1P39059 KRT18P60-201ENST00000312876 1297 ntBASIC32.51■■■□□ 2.79
COL15A1P39059 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
COL15A1P39059 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC32.5■■■□□ 2.79
COL15A1P39059 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
COL15A1P39059 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
COL15A1P39059 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC32.48■■■□□ 2.79
COL15A1P39059 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
COL15A1P39059 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
COL15A1P39059 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC32.47■■■□□ 2.79
COL15A1P39059 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
COL15A1P39059 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
COL15A1P39059 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC32.46■■■□□ 2.79
COL15A1P39059 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC32.46■■■□□ 2.79
COL15A1P39059 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
COL15A1P39059 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC32.46■■■□□ 2.79
COL15A1P39059 ST7-202ENST00000323984 2142 ntTSL 5 BASIC32.46■■■□□ 2.79
COL15A1P39059 ST7-207ENST00000393449 2127 ntTSL 5 BASIC32.46■■■□□ 2.79
COL15A1P39059 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
COL15A1P39059 MED25-210ENST00000612854 801 ntTSL 5 BASIC32.45■■■□□ 2.79
COL15A1P39059 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
COL15A1P39059 MED25-214ENST00000622402 642 ntTSL 5 BASIC32.45■■■□□ 2.79
COL15A1P39059 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC32.45■■■□□ 2.79
COL15A1P39059 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
COL15A1P39059 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
COL15A1P39059 ECEL1P2-201ENST00000461596 1295 ntBASIC32.45■■■□□ 2.78
COL15A1P39059 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC32.44■■■□□ 2.78
COL15A1P39059 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms