Protein–RNA interactions for Protein: P38931

SSN2, Mediator of RNA polymerase II transcription subunit 13, yeastyeast

Predictions only

Length 1,420 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN2P38931 AIM46YHR199C 933 nt12.96□□□□□ -0.33
SSN2P38931 YPQ1YOL092W 927 nt12.96□□□□□ -0.33
SSN2P38931 CST26YBR042C 1194 nt12.96□□□□□ -0.33
SSN2P38931 TGL5YOR081C 2250 nt12.96□□□□□ -0.33
SSN2P38931 CKI1YLR133W 1749 nt12.96□□□□□ -0.34
SSN2P38931 TPO4YOR273C 1980 nt12.95□□□□□ -0.34
SSN2P38931 PDA1YER178W 1263 nt12.95□□□□□ -0.34
SSN2P38931 STS1YIR011C 960 nt12.95□□□□□ -0.34
SSN2P38931 TDA4YJR116W 840 nt12.95□□□□□ -0.34
SSN2P38931 AOS1YPR180W 1044 nt12.95□□□□□ -0.34
SSN2P38931 GLY1YEL046C 1164 nt12.94□□□□□ -0.34
SSN2P38931 YGR137WYGR137W 375 nt12.93□□□□□ -0.34
SSN2P38931 INP54YOL065C 1155 nt12.93□□□□□ -0.34
SSN2P38931 RRP43YCR035C 1185 nt12.92□□□□□ -0.34
SSN2P38931 MSI1YBR195C 1269 nt12.91□□□□□ -0.34
SSN2P38931 INM1YHR046C 888 nt12.9□□□□□ -0.34
SSN2P38931 NBA1YOL070C 1506 nt12.88□□□□□ -0.35
SSN2P38931 YJL144WYJL144W 315 nt12.88□□□□□ -0.35
SSN2P38931 ZIM17YNL310C 525 nt12.88□□□□□ -0.35
SSN2P38931 PPZ2YDR436W 2133 nt12.87□□□□□ -0.35
SSN2P38931 HEL2YDR266C 1920 nt12.87□□□□□ -0.35
SSN2P38931 YPC1YBR183W 951 nt12.87□□□□□ -0.35
SSN2P38931 SKP1YDR328C 585 nt12.86□□□□□ -0.35
SSN2P38931 YPL067CYPL067C 597 nt12.86□□□□□ -0.35
SSN2P38931 SPE3YPR069C 882 nt12.86□□□□□ -0.35
SSN2P38931 MAS2YHR024C 1449 nt12.86□□□□□ -0.35
SSN2P38931 TPO1YLL028W 1761 nt12.84□□□□□ -0.35
SSN2P38931 CPR2YHR057C 618 nt12.84□□□□□ -0.35
SSN2P38931 YNL140CYNL140C 570 nt12.83□□□□□ -0.36
SSN2P38931 PUS4YNL292W 1212 nt12.81□□□□□ -0.36
SSN2P38931 TIF3YPR163C 1311 nt12.81□□□□□ -0.36
SSN2P38931 tD(GUC)BtD(GUC)B 72 nt12.8□□□□□ -0.36
SSN2P38931 tD(GUC)DtD(GUC)D 72 nt12.8□□□□□ -0.36
SSN2P38931 tD(GUC)G1tD(GUC)G1 72 nt12.8□□□□□ -0.36
SSN2P38931 tD(GUC)G2tD(GUC)G2 72 nt12.8□□□□□ -0.36
SSN2P38931 tD(GUC)I1tD(GUC)I1 72 nt12.8□□□□□ -0.36
SSN2P38931 tD(GUC)I2tD(GUC)I2 72 nt12.8□□□□□ -0.36
SSN2P38931 tD(GUC)J1tD(GUC)J1 72 nt12.8□□□□□ -0.36
SSN2P38931 tD(GUC)J2tD(GUC)J2 72 nt12.8□□□□□ -0.36
SSN2P38931 tD(GUC)J3tD(GUC)J3 72 nt12.8□□□□□ -0.36
SSN2P38931 tD(GUC)J4tD(GUC)J4 72 nt12.8□□□□□ -0.36
SSN2P38931 tD(GUC)KtD(GUC)K 72 nt12.8□□□□□ -0.36
SSN2P38931 tD(GUC)L1tD(GUC)L1 72 nt12.8□□□□□ -0.36
SSN2P38931 tD(GUC)L2tD(GUC)L2 72 nt12.8□□□□□ -0.36
SSN2P38931 tD(GUC)MtD(GUC)M 72 nt12.8□□□□□ -0.36
SSN2P38931 tD(GUC)OtD(GUC)O 72 nt12.8□□□□□ -0.36
SSN2P38931 PRS4YBL068W 981 nt12.8□□□□□ -0.36
SSN2P38931 SRY1YKL218C 981 nt12.79□□□□□ -0.36
SSN2P38931 PTH2YBL057C 627 nt12.79□□□□□ -0.36
SSN2P38931 PRY2YKR013W 990 nt12.77□□□□□ -0.37
SSN2P38931 VPS65YLR322W 315 nt12.77□□□□□ -0.37
SSN2P38931 MCP1YOR228C 909 nt12.75□□□□□ -0.37
SSN2P38931 HRB1YNL004W 1365 nt12.74□□□□□ -0.37
SSN2P38931 snR30snR30 606 nt12.74□□□□□ -0.37
SSN2P38931 KTR4YBR199W 1395 nt12.74□□□□□ -0.37
SSN2P38931 CDA1YLR307W 906 nt12.73□□□□□ -0.37
SSN2P38931 YOR111WYOR111W 699 nt12.73□□□□□ -0.37
SSN2P38931 YPT10YBR264C 600 nt12.73□□□□□ -0.37
SSN2P38931 DSC3YOR223W 879 nt12.71□□□□□ -0.37
SSN2P38931 DPM1YPR183W 804 nt12.71□□□□□ -0.37
SSN2P38931 YER152CYER152C 1332 nt12.7□□□□□ -0.38
SSN2P38931 GET2YER083C 858 nt12.7□□□□□ -0.38
SSN2P38931 LDB7YBL006C 543 nt12.7□□□□□ -0.38
SSN2P38931 DAL80YKR034W 810 nt12.68□□□□□ -0.38
SSN2P38931 YML122CYML122C 381 nt12.68□□□□□ -0.38
SSN2P38931 BIO3YNR058W 1443 nt12.67□□□□□ -0.38
SSN2P38931 YHR033WYHR033W 1272 nt12.67□□□□□ -0.38
SSN2P38931 snR4snR4 186 nt12.67□□□□□ -0.38
SSN2P38931 FIT1YDR534C 1587 nt12.66□□□□□ -0.38
SSN2P38931 LGE1YPL055C 999 nt12.66□□□□□ -0.38
SSN2P38931 MAE1YKL029C 2010 nt12.66□□□□□ -0.38
SSN2P38931 PLB3YOL011W 2061 nt12.66□□□□□ -0.38
SSN2P38931 PIL1YGR086C 1020 nt12.65□□□□□ -0.38
SSN2P38931 MPH3YJR160C 1809 nt12.63□□□□□ -0.39
SSN2P38931 NFS1YCL017C 1494 nt12.61□□□□□ -0.39
SSN2P38931 MIM1YOL026C 342 nt12.61□□□□□ -0.39
SSN2P38931 NAF1YNL124W 1479 nt12.59□□□□□ -0.39
SSN2P38931 YDR215CYDR215C 414 nt12.58□□□□□ -0.4
SSN2P38931 ORT1YOR130C 879 nt12.58□□□□□ -0.4
SSN2P38931 YPR130CYPR130C 408 nt12.58□□□□□ -0.4
SSN2P38931 YLR162WYLR162W 357 nt12.56□□□□□ -0.4
SSN2P38931 AVL9YLR114C 2295 nt12.56□□□□□ -0.4
SSN2P38931 DML1YMR211W 1428 nt12.55□□□□□ -0.4
SSN2P38931 DCR2YLR361C 1737 nt12.55□□□□□ -0.4
SSN2P38931 BDS1YOL164W 1941 nt12.55□□□□□ -0.4
SSN2P38931 LEO1YOR123C 1395 nt12.54□□□□□ -0.4
SSN2P38931 CCW12YLR110C 402 nt12.54□□□□□ -0.4
SSN2P38931 CYS4YGR155W 1524 nt12.52□□□□□ -0.41
SSN2P38931 OPI1YHL020C 1215 nt12.51□□□□□ -0.41
SSN2P38931 RCF2YNR018W 675 nt12.51□□□□□ -0.41
SSN2P38931 CKB1YGL019W 837 nt12.49□□□□□ -0.41
SSN2P38931 CIA1YDR267C 993 nt12.47□□□□□ -0.41
SSN2P38931 YHL008CYHL008C 1884 nt12.47□□□□□ -0.41
SSN2P38931 SNA3YJL151C 402 nt12.45□□□□□ -0.42
SSN2P38931 PET10YKR046C 852 nt12.45□□□□□ -0.42
SSN2P38931 AAD14YNL331C 1131 nt12.45□□□□□ -0.42
SSN2P38931 RPL2AYFR031C-A 765 nt12.45□□□□□ -0.42
SSN2P38931 YCL049CYCL049C 939 nt12.44□□□□□ -0.42
SSN2P38931 PMP3YDR276C 168 nt12.43□□□□□ -0.42
SSN2P38931 PAM17YKR065C 594 nt12.43□□□□□ -0.42
Retrieved 100 of 7,029 protein–RNA pairs in 82.5 ms