Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HIST1H1DP16402 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HIST1H1DP16402 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIST1H1DP16402 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIST1H1DP16402 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIST1H1DP16402 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIST1H1DP16402 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIST1H1DP16402 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
HIST1H1DP16402 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HIST1H1DP16402 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIST1H1DP16402 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HIST1H1DP16402 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIST1H1DP16402 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.49■■□□□ 1.03
HIST1H1DP16402 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIST1H1DP16402 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIST1H1DP16402 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIST1H1DP16402 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
HIST1H1DP16402 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
HIST1H1DP16402 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HIST1H1DP16402 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
HIST1H1DP16402 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HIST1H1DP16402 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
HIST1H1DP16402 CAHM-201ENST00000604200 896 ntBASIC21.46■■□□□ 1.03
HIST1H1DP16402 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HIST1H1DP16402 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
HIST1H1DP16402 AL449106.1-201ENST00000608517 1980 ntBASIC21.45■■□□□ 1.02
HIST1H1DP16402 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.45■■□□□ 1.02
HIST1H1DP16402 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HIST1H1DP16402 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HIST1H1DP16402 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
HIST1H1DP16402 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HIST1H1DP16402 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
HIST1H1DP16402 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HIST1H1DP16402 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.43■■□□□ 1.02
HIST1H1DP16402 AC135731.1-201ENST00000569415 2548 ntBASIC21.43■■□□□ 1.02
HIST1H1DP16402 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
HIST1H1DP16402 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
HIST1H1DP16402 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.43■■□□□ 1.02
HIST1H1DP16402 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.43■■□□□ 1.02
HIST1H1DP16402 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HIST1H1DP16402 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HIST1H1DP16402 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIST1H1DP16402 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.42■■□□□ 1.02
HIST1H1DP16402 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIST1H1DP16402 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HIST1H1DP16402 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIST1H1DP16402 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIST1H1DP16402 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIST1H1DP16402 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIST1H1DP16402 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
HIST1H1DP16402 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HIST1H1DP16402 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
HIST1H1DP16402 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.41■■□□□ 1.02
HIST1H1DP16402 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.4■■□□□ 1.02
HIST1H1DP16402 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
HIST1H1DP16402 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HIST1H1DP16402 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HIST1H1DP16402 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
HIST1H1DP16402 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.39■■□□□ 1.02
HIST1H1DP16402 AC018358.1-201ENST00000631079 1402 ntBASIC21.39■■□□□ 1.02
HIST1H1DP16402 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
HIST1H1DP16402 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HIST1H1DP16402 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HIST1H1DP16402 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
HIST1H1DP16402 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.37■■□□□ 1.01
HIST1H1DP16402 AC136428.2-201ENST00000563187 214 ntBASIC21.37■■□□□ 1.01
HIST1H1DP16402 AC091060.1-201ENST00000623524 1766 ntBASIC21.37■■□□□ 1.01
HIST1H1DP16402 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.36■■□□□ 1.01
HIST1H1DP16402 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
HIST1H1DP16402 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HIST1H1DP16402 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HIST1H1DP16402 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HIST1H1DP16402 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
HIST1H1DP16402 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
HIST1H1DP16402 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HIST1H1DP16402 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.35■■□□□ 1.01
HIST1H1DP16402 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
HIST1H1DP16402 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HIST1H1DP16402 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.35■■□□□ 1.01
HIST1H1DP16402 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HIST1H1DP16402 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.34■■□□□ 1.01
HIST1H1DP16402 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HIST1H1DP16402 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HIST1H1DP16402 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.34■■□□□ 1.01
HIST1H1DP16402 AC135983.2-203ENST00000454486 1613 ntBASIC21.33■■□□□ 1.01
HIST1H1DP16402 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
HIST1H1DP16402 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
HIST1H1DP16402 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
HIST1H1DP16402 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HIST1H1DP16402 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.32■■□□□ 1
HIST1H1DP16402 AC097358.2-201ENST00000607541 1159 ntBASIC21.32■■□□□ 1
HIST1H1DP16402 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.32■■□□□ 1
HIST1H1DP16402 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.31■■□□□ 1
HIST1H1DP16402 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.31■■□□□ 1
HIST1H1DP16402 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.31■■□□□ 1
HIST1H1DP16402 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.31■■□□□ 1
HIST1H1DP16402 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.31■■□□□ 1
HIST1H1DP16402 MIR762-201ENST00000390236 83 ntBASIC21.31■■□□□ 1
HIST1H1DP16402 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HIST1H1DP16402 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms