Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.34
UBL4AP11441 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.39■■□□□ 1.33
UBL4AP11441 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.39■■□□□ 1.33
UBL4AP11441 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.39■■□□□ 1.33
UBL4AP11441 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.38■■□□□ 1.33
UBL4AP11441 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.37■■□□□ 1.33
UBL4AP11441 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
UBL4AP11441 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.37■■□□□ 1.33
UBL4AP11441 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.37■■□□□ 1.33
UBL4AP11441 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
UBL4AP11441 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
UBL4AP11441 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
UBL4AP11441 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
UBL4AP11441 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
UBL4AP11441 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.35■■□□□ 1.33
UBL4AP11441 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.34■■□□□ 1.33
UBL4AP11441 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.34■■□□□ 1.33
UBL4AP11441 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
UBL4AP11441 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
UBL4AP11441 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.34■■□□□ 1.33
UBL4AP11441 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
UBL4AP11441 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.33■■□□□ 1.33
UBL4AP11441 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
UBL4AP11441 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
UBL4AP11441 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.32■■□□□ 1.32
UBL4AP11441 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
UBL4AP11441 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
UBL4AP11441 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.32■■□□□ 1.32
UBL4AP11441 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
UBL4AP11441 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.32■■□□□ 1.32
UBL4AP11441 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
UBL4AP11441 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
UBL4AP11441 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
UBL4AP11441 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
UBL4AP11441 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
UBL4AP11441 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
UBL4AP11441 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.31■■□□□ 1.32
UBL4AP11441 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
UBL4AP11441 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
UBL4AP11441 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
UBL4AP11441 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
UBL4AP11441 AP002414.2-202ENST00000590929 1450 ntBASIC23.3■■□□□ 1.32
UBL4AP11441 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
UBL4AP11441 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
UBL4AP11441 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
UBL4AP11441 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
UBL4AP11441 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
UBL4AP11441 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
UBL4AP11441 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
UBL4AP11441 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
UBL4AP11441 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.26■■□□□ 1.31
UBL4AP11441 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
UBL4AP11441 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
UBL4AP11441 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
UBL4AP11441 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
UBL4AP11441 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
UBL4AP11441 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
UBL4AP11441 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.24■■□□□ 1.31
UBL4AP11441 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
UBL4AP11441 LINC01971-201ENST00000617888 1048 ntBASIC23.24■■□□□ 1.31
UBL4AP11441 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
UBL4AP11441 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UBL4AP11441 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UBL4AP11441 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
UBL4AP11441 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.22■■□□□ 1.31
UBL4AP11441 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
UBL4AP11441 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
UBL4AP11441 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
UBL4AP11441 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.21■■□□□ 1.31
UBL4AP11441 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.21■■□□□ 1.31
UBL4AP11441 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.21■■□□□ 1.31
UBL4AP11441 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UBL4AP11441 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
UBL4AP11441 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
UBL4AP11441 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
UBL4AP11441 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
UBL4AP11441 AC110285.7-201ENST00000624417 1536 ntBASIC23.2■■□□□ 1.3
UBL4AP11441 ZNRF2P2-203ENST00000454624 420 ntBASIC23.2■■□□□ 1.3
UBL4AP11441 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.2■■□□□ 1.3
UBL4AP11441 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UBL4AP11441 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.19■■□□□ 1.3
UBL4AP11441 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.19■■□□□ 1.3
UBL4AP11441 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
UBL4AP11441 BX255925.1-201ENST00000566954 1854 ntBASIC23.19■■□□□ 1.3
UBL4AP11441 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
UBL4AP11441 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
UBL4AP11441 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
UBL4AP11441 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
UBL4AP11441 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.16■■□□□ 1.3
UBL4AP11441 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
UBL4AP11441 LINC01003-201ENST00000564834 1764 ntBASIC23.16■■□□□ 1.3
UBL4AP11441 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
UBL4AP11441 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
UBL4AP11441 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
UBL4AP11441 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.15■■□□□ 1.3
UBL4AP11441 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.15■■□□□ 1.3
UBL4AP11441 ABHD17AP4-201ENST00000411545 909 ntBASIC23.15■■□□□ 1.3
UBL4AP11441 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.15■■□□□ 1.3
UBL4AP11441 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
UBL4AP11441 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms