Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
CD28P10747 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD28P10747 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.89■□□□□ 0.77
CD28P10747 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CD28P10747 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.89■□□□□ 0.77
CD28P10747 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.89■□□□□ 0.77
CD28P10747 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD28P10747 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CD28P10747 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CD28P10747 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CD28P10747 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD28P10747 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD28P10747 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD28P10747 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD28P10747 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD28P10747 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.87■□□□□ 0.77
CD28P10747 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD28P10747 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD28P10747 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD28P10747 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD28P10747 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CD28P10747 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CD28P10747 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CD28P10747 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.86■□□□□ 0.77
CD28P10747 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.85■□□□□ 0.77
CD28P10747 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CD28P10747 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.85■□□□□ 0.77
CD28P10747 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD28P10747 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CD28P10747 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CD28P10747 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.84■□□□□ 0.77
CD28P10747 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.84■□□□□ 0.77
CD28P10747 AC148477.6-201ENST00000623746 465 ntBASIC19.84■□□□□ 0.77
CD28P10747 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD28P10747 ST7-AS1-201ENST00000456775 1889 ntBASIC19.84■□□□□ 0.77
CD28P10747 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
CD28P10747 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CD28P10747 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CD28P10747 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.83■□□□□ 0.76
CD28P10747 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD28P10747 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.82■□□□□ 0.76
CD28P10747 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CD28P10747 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.82■□□□□ 0.76
CD28P10747 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD28P10747 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD28P10747 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CD28P10747 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.82■□□□□ 0.76
CD28P10747 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD28P10747 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CD28P10747 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD28P10747 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD28P10747 MIR219A2-201ENST00000608502 1504 ntBASIC19.81■□□□□ 0.76
CD28P10747 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD28P10747 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.8■□□□□ 0.76
CD28P10747 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD28P10747 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD28P10747 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD28P10747 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD28P10747 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.8■□□□□ 0.76
CD28P10747 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD28P10747 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.8■□□□□ 0.76
CD28P10747 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD28P10747 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CD28P10747 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CD28P10747 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD28P10747 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD28P10747 AC060814.1-201ENST00000554326 538 ntBASIC19.78■□□□□ 0.76
CD28P10747 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CD28P10747 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD28P10747 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CD28P10747 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CD28P10747 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CD28P10747 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.77■□□□□ 0.76
CD28P10747 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD28P10747 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.76■□□□□ 0.75
CD28P10747 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CD28P10747 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CD28P10747 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD28P10747 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD28P10747 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.75■□□□□ 0.75
CD28P10747 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD28P10747 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD28P10747 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CD28P10747 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.75■□□□□ 0.75
CD28P10747 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD28P10747 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.74■□□□□ 0.75
CD28P10747 NTF6A-201ENST00000591175 560 ntBASIC19.74■□□□□ 0.75
CD28P10747 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CD28P10747 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CD28P10747 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD28P10747 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CD28P10747 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD28P10747 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CD28P10747 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD28P10747 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CD28P10747 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD28P10747 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CD28P10747 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CD28P10747 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CD28P10747 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms