Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.9■■□□□ 1.26
HMGN1P05114 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
HMGN1P05114 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.9■■□□□ 1.26
HMGN1P05114 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HMGN1P05114 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
HMGN1P05114 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC22.89■■□□□ 1.25
HMGN1P05114 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.25
HMGN1P05114 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
HMGN1P05114 AC097358.2-201ENST00000607541 1159 ntBASIC22.88■■□□□ 1.25
HMGN1P05114 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
HMGN1P05114 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
HMGN1P05114 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.88■■□□□ 1.25
HMGN1P05114 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.87■■□□□ 1.25
HMGN1P05114 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
HMGN1P05114 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
HMGN1P05114 AC136428.2-201ENST00000563187 214 ntBASIC22.87■■□□□ 1.25
HMGN1P05114 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.86■■□□□ 1.25
HMGN1P05114 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
HMGN1P05114 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
HMGN1P05114 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.86■■□□□ 1.25
HMGN1P05114 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
HMGN1P05114 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
HMGN1P05114 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.85■■□□□ 1.25
HMGN1P05114 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
HMGN1P05114 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC22.84■■□□□ 1.25
HMGN1P05114 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
HMGN1P05114 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
HMGN1P05114 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
HMGN1P05114 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
HMGN1P05114 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC22.83■■□□□ 1.25
HMGN1P05114 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
HMGN1P05114 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
HMGN1P05114 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.82■■□□□ 1.24
HMGN1P05114 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
HMGN1P05114 MIR762-201ENST00000390236 83 ntBASIC22.82■■□□□ 1.24
HMGN1P05114 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.82■■□□□ 1.24
HMGN1P05114 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.81■■□□□ 1.24
HMGN1P05114 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.81■■□□□ 1.24
HMGN1P05114 AC135731.1-201ENST00000569415 2548 ntBASIC22.81■■□□□ 1.24
HMGN1P05114 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HMGN1P05114 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
HMGN1P05114 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.8■■□□□ 1.24
HMGN1P05114 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.8■■□□□ 1.24
HMGN1P05114 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.8■■□□□ 1.24
HMGN1P05114 AC018358.1-201ENST00000631079 1402 ntBASIC22.79■■□□□ 1.24
HMGN1P05114 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
HMGN1P05114 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.78■■□□□ 1.24
HMGN1P05114 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
HMGN1P05114 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.77■■□□□ 1.24
HMGN1P05114 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
HMGN1P05114 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
HMGN1P05114 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
HMGN1P05114 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.77■■□□□ 1.24
HMGN1P05114 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
HMGN1P05114 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
HMGN1P05114 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
HMGN1P05114 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
HMGN1P05114 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
HMGN1P05114 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
HMGN1P05114 AC135983.2-203ENST00000454486 1613 ntBASIC22.75■■□□□ 1.23
HMGN1P05114 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
HMGN1P05114 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
HMGN1P05114 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
HMGN1P05114 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.75■■□□□ 1.23
HMGN1P05114 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HMGN1P05114 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
HMGN1P05114 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
HMGN1P05114 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
HMGN1P05114 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
HMGN1P05114 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
HMGN1P05114 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.74■■□□□ 1.23
HMGN1P05114 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.74■■□□□ 1.23
HMGN1P05114 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
HMGN1P05114 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.73■■□□□ 1.23
HMGN1P05114 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
HMGN1P05114 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
HMGN1P05114 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.73■■□□□ 1.23
HMGN1P05114 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.73■■□□□ 1.23
HMGN1P05114 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
HMGN1P05114 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
HMGN1P05114 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
HMGN1P05114 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
HMGN1P05114 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
HMGN1P05114 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.72■■□□□ 1.23
HMGN1P05114 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
HMGN1P05114 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC22.71■■□□□ 1.23
HMGN1P05114 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
HMGN1P05114 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.71■■□□□ 1.23
HMGN1P05114 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
HMGN1P05114 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.7■■□□□ 1.22
HMGN1P05114 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.7■■□□□ 1.22
HMGN1P05114 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.7■■□□□ 1.22
HMGN1P05114 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
HMGN1P05114 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
HMGN1P05114 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HMGN1P05114 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
HMGN1P05114 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
HMGN1P05114 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HMGN1P05114 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
HMGN1P05114 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms