Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.95■■□□□ 1.58
TRIM13O60858 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
TRIM13O60858 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.95■■□□□ 1.58
TRIM13O60858 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
TRIM13O60858 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.94■■□□□ 1.58
TRIM13O60858 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.93■■□□□ 1.58
TRIM13O60858 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TRIM13O60858 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
TRIM13O60858 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.93■■□□□ 1.58
TRIM13O60858 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
TRIM13O60858 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
TRIM13O60858 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
TRIM13O60858 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.92■■□□□ 1.58
TRIM13O60858 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
TRIM13O60858 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.91■■□□□ 1.58
TRIM13O60858 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TRIM13O60858 MIR762-201ENST00000390236 83 ntBASIC24.91■■□□□ 1.58
TRIM13O60858 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
TRIM13O60858 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
TRIM13O60858 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.9■■□□□ 1.58
TRIM13O60858 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.9■■□□□ 1.58
TRIM13O60858 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.9■■□□□ 1.58
TRIM13O60858 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TRIM13O60858 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.89■■□□□ 1.58
TRIM13O60858 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TRIM13O60858 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TRIM13O60858 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.89■■□□□ 1.57
TRIM13O60858 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
TRIM13O60858 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.88■■□□□ 1.57
TRIM13O60858 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TRIM13O60858 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.87■■□□□ 1.57
TRIM13O60858 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
TRIM13O60858 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM13O60858 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM13O60858 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM13O60858 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
TRIM13O60858 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.86■■□□□ 1.57
TRIM13O60858 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
TRIM13O60858 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
TRIM13O60858 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
TRIM13O60858 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
TRIM13O60858 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.85■■□□□ 1.57
TRIM13O60858 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.85■■□□□ 1.57
TRIM13O60858 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.85■■□□□ 1.57
TRIM13O60858 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
TRIM13O60858 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TRIM13O60858 AC135983.2-203ENST00000454486 1613 ntBASIC24.84■■□□□ 1.57
TRIM13O60858 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
TRIM13O60858 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
TRIM13O60858 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.83■■□□□ 1.57
TRIM13O60858 AC018358.1-201ENST00000631079 1402 ntBASIC24.83■■□□□ 1.57
TRIM13O60858 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TRIM13O60858 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
TRIM13O60858 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM13O60858 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
TRIM13O60858 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM13O60858 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM13O60858 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.82■■□□□ 1.56
TRIM13O60858 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.82■■□□□ 1.56
TRIM13O60858 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM13O60858 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.81■■□□□ 1.56
TRIM13O60858 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.81■■□□□ 1.56
TRIM13O60858 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TRIM13O60858 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
TRIM13O60858 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRIM13O60858 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRIM13O60858 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM13O60858 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM13O60858 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM13O60858 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
TRIM13O60858 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM13O60858 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM13O60858 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
TRIM13O60858 AL449106.1-201ENST00000608517 1980 ntBASIC24.78■■□□□ 1.56
TRIM13O60858 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
TRIM13O60858 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM13O60858 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.77■■□□□ 1.56
TRIM13O60858 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.77■■□□□ 1.56
TRIM13O60858 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.77■■□□□ 1.56
TRIM13O60858 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
TRIM13O60858 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
TRIM13O60858 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.77■■□□□ 1.56
TRIM13O60858 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
TRIM13O60858 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM13O60858 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM13O60858 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM13O60858 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
TRIM13O60858 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM13O60858 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM13O60858 WHAMMP2-203ENST00000563942 1603 ntBASIC24.75■■□□□ 1.55
TRIM13O60858 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
TRIM13O60858 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
TRIM13O60858 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM13O60858 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
TRIM13O60858 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM13O60858 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM13O60858 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.74■■□□□ 1.55
TRIM13O60858 AC005559.1-201ENST00000589661 871 ntBASIC24.74■■□□□ 1.55
TRIM13O60858 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM13O60858 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms