Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC14.44□□□□□ -0.1
CHKB-CPT1BH3BT56 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CHKB-CPT1BH3BT56 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CHKB-CPT1BH3BT56 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHKB-CPT1BH3BT56 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHKB-CPT1BH3BT56 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC14.43□□□□□ -0.1
CHKB-CPT1BH3BT56 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHKB-CPT1BH3BT56 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHKB-CPT1BH3BT56 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHKB-CPT1BH3BT56 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC14.42□□□□□ -0.1
CHKB-CPT1BH3BT56 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CHKB-CPT1BH3BT56 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHKB-CPT1BH3BT56 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHKB-CPT1BH3BT56 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.41□□□□□ -0.1
CHKB-CPT1BH3BT56 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHKB-CPT1BH3BT56 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHKB-CPT1BH3BT56 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHKB-CPT1BH3BT56 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHKB-CPT1BH3BT56 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
CHKB-CPT1BH3BT56 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CHKB-CPT1BH3BT56 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHKB-CPT1BH3BT56 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHKB-CPT1BH3BT56 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHKB-CPT1BH3BT56 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CHKB-CPT1BH3BT56 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHKB-CPT1BH3BT56 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHKB-CPT1BH3BT56 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHKB-CPT1BH3BT56 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHKB-CPT1BH3BT56 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHKB-CPT1BH3BT56 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHKB-CPT1BH3BT56 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHKB-CPT1BH3BT56 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC14.38□□□□□ -0.11
CHKB-CPT1BH3BT56 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHKB-CPT1BH3BT56 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHKB-CPT1BH3BT56 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CHKB-CPT1BH3BT56 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CHKB-CPT1BH3BT56 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHKB-CPT1BH3BT56 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHKB-CPT1BH3BT56 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHKB-CPT1BH3BT56 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHKB-CPT1BH3BT56 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC14.37□□□□□ -0.11
CHKB-CPT1BH3BT56 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CHKB-CPT1BH3BT56 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHKB-CPT1BH3BT56 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHKB-CPT1BH3BT56 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHKB-CPT1BH3BT56 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC14.36□□□□□ -0.11
CHKB-CPT1BH3BT56 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHKB-CPT1BH3BT56 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHKB-CPT1BH3BT56 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHKB-CPT1BH3BT56 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHKB-CPT1BH3BT56 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHKB-CPT1BH3BT56 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CHKB-CPT1BH3BT56 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHKB-CPT1BH3BT56 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHKB-CPT1BH3BT56 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CHKB-CPT1BH3BT56 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHKB-CPT1BH3BT56 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHKB-CPT1BH3BT56 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC14.33□□□□□ -0.11
CHKB-CPT1BH3BT56 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHKB-CPT1BH3BT56 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHKB-CPT1BH3BT56 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHKB-CPT1BH3BT56 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHKB-CPT1BH3BT56 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHKB-CPT1BH3BT56 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHKB-CPT1BH3BT56 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHKB-CPT1BH3BT56 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC14.31□□□□□ -0.12
CHKB-CPT1BH3BT56 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHKB-CPT1BH3BT56 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CHKB-CPT1BH3BT56 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CHKB-CPT1BH3BT56 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHKB-CPT1BH3BT56 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHKB-CPT1BH3BT56 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHKB-CPT1BH3BT56 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC14.31□□□□□ -0.12
CHKB-CPT1BH3BT56 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
CHKB-CPT1BH3BT56 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CHKB-CPT1BH3BT56 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHKB-CPT1BH3BT56 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
CHKB-CPT1BH3BT56 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CHKB-CPT1BH3BT56 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHKB-CPT1BH3BT56 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHKB-CPT1BH3BT56 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHKB-CPT1BH3BT56 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CHKB-CPT1BH3BT56 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CHKB-CPT1BH3BT56 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CHKB-CPT1BH3BT56 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHKB-CPT1BH3BT56 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHKB-CPT1BH3BT56 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHKB-CPT1BH3BT56 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CHKB-CPT1BH3BT56 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHKB-CPT1BH3BT56 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHKB-CPT1BH3BT56 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC14.27□□□□□ -0.12
CHKB-CPT1BH3BT56 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHKB-CPT1BH3BT56 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CHKB-CPT1BH3BT56 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CHKB-CPT1BH3BT56 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHKB-CPT1BH3BT56 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC14.27□□□□□ -0.13
CHKB-CPT1BH3BT56 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC14.26□□□□□ -0.13
CHKB-CPT1BH3BT56 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHKB-CPT1BH3BT56 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CHKB-CPT1BH3BT56 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms