Protein–RNA interactions for Protein: A0A1B0GVV1

SMIM35, Small integral membrane protein 35, humanhuman

Predictions only

Length 85 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM35A0A1B0GVV1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
SMIM35A0A1B0GVV1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
SMIM35A0A1B0GVV1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
SMIM35A0A1B0GVV1 AC022413.1-201ENST00000624602 984 ntBASIC28.2■■■□□ 2.1
SMIM35A0A1B0GVV1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.2■■■□□ 2.1
SMIM35A0A1B0GVV1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SMIM35A0A1B0GVV1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
SMIM35A0A1B0GVV1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SMIM35A0A1B0GVV1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.18■■■□□ 2.1
SMIM35A0A1B0GVV1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.18■■■□□ 2.1
SMIM35A0A1B0GVV1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SMIM35A0A1B0GVV1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SMIM35A0A1B0GVV1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.18■■■□□ 2.1
SMIM35A0A1B0GVV1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SMIM35A0A1B0GVV1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SMIM35A0A1B0GVV1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SMIM35A0A1B0GVV1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SMIM35A0A1B0GVV1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.15■■■□□ 2.1
SMIM35A0A1B0GVV1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
SMIM35A0A1B0GVV1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SMIM35A0A1B0GVV1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.13■■■□□ 2.09
SMIM35A0A1B0GVV1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
SMIM35A0A1B0GVV1 MIR219A2-201ENST00000608502 1504 ntBASIC28.13■■■□□ 2.09
SMIM35A0A1B0GVV1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SMIM35A0A1B0GVV1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.12■■■□□ 2.09
SMIM35A0A1B0GVV1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.12■■■□□ 2.09
SMIM35A0A1B0GVV1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
SMIM35A0A1B0GVV1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SMIM35A0A1B0GVV1 ABHD17AP5-201ENST00000580133 923 ntBASIC28.12■■■□□ 2.09
SMIM35A0A1B0GVV1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SMIM35A0A1B0GVV1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
SMIM35A0A1B0GVV1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SMIM35A0A1B0GVV1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.11■■■□□ 2.09
SMIM35A0A1B0GVV1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.11■■■□□ 2.09
SMIM35A0A1B0GVV1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
SMIM35A0A1B0GVV1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SMIM35A0A1B0GVV1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
SMIM35A0A1B0GVV1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
SMIM35A0A1B0GVV1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
SMIM35A0A1B0GVV1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SMIM35A0A1B0GVV1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
SMIM35A0A1B0GVV1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
SMIM35A0A1B0GVV1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
SMIM35A0A1B0GVV1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
SMIM35A0A1B0GVV1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SMIM35A0A1B0GVV1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
SMIM35A0A1B0GVV1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SMIM35A0A1B0GVV1 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SMIM35A0A1B0GVV1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SMIM35A0A1B0GVV1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
SMIM35A0A1B0GVV1 AC060814.1-201ENST00000554326 538 ntBASIC28.05■■■□□ 2.08
SMIM35A0A1B0GVV1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.05■■■□□ 2.08
SMIM35A0A1B0GVV1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.03■■■□□ 2.08
SMIM35A0A1B0GVV1 AC100797.4-201ENST00000631653 1827 ntBASIC28.03■■■□□ 2.08
SMIM35A0A1B0GVV1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.03■■■□□ 2.08
SMIM35A0A1B0GVV1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SMIM35A0A1B0GVV1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
SMIM35A0A1B0GVV1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SMIM35A0A1B0GVV1 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.08
SMIM35A0A1B0GVV1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
SMIM35A0A1B0GVV1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28■■■□□ 2.07
SMIM35A0A1B0GVV1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28■■■□□ 2.07
SMIM35A0A1B0GVV1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC27.99■■■□□ 2.07
SMIM35A0A1B0GVV1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
SMIM35A0A1B0GVV1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
SMIM35A0A1B0GVV1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.98■■■□□ 2.07
SMIM35A0A1B0GVV1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC27.97■■■□□ 2.07
SMIM35A0A1B0GVV1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
SMIM35A0A1B0GVV1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
SMIM35A0A1B0GVV1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
SMIM35A0A1B0GVV1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SMIM35A0A1B0GVV1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC27.96■■■□□ 2.07
SMIM35A0A1B0GVV1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
SMIM35A0A1B0GVV1 AL139393.2-201ENST00000608721 2025 ntBASIC27.95■■■□□ 2.06
SMIM35A0A1B0GVV1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SMIM35A0A1B0GVV1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
SMIM35A0A1B0GVV1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC27.94■■■□□ 2.06
SMIM35A0A1B0GVV1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.94■■■□□ 2.06
SMIM35A0A1B0GVV1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.94■■■□□ 2.06
SMIM35A0A1B0GVV1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
SMIM35A0A1B0GVV1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
SMIM35A0A1B0GVV1 AC092296.2-201ENST00000589470 999 ntBASIC27.92■■■□□ 2.06
SMIM35A0A1B0GVV1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
SMIM35A0A1B0GVV1 MED25-210ENST00000612854 801 ntTSL 5 BASIC27.91■■■□□ 2.06
SMIM35A0A1B0GVV1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
SMIM35A0A1B0GVV1 MED25-214ENST00000622402 642 ntTSL 5 BASIC27.91■■■□□ 2.06
SMIM35A0A1B0GVV1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.91■■■□□ 2.06
SMIM35A0A1B0GVV1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
SMIM35A0A1B0GVV1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
SMIM35A0A1B0GVV1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
SMIM35A0A1B0GVV1 AC126177.7-201ENST00000547904 679 ntBASIC27.9■■■□□ 2.06
SMIM35A0A1B0GVV1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC27.9■■■□□ 2.06
SMIM35A0A1B0GVV1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
SMIM35A0A1B0GVV1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
SMIM35A0A1B0GVV1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.89■■■□□ 2.06
SMIM35A0A1B0GVV1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
SMIM35A0A1B0GVV1 NTF6A-201ENST00000591175 560 ntBASIC27.89■■■□□ 2.06
SMIM35A0A1B0GVV1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
SMIM35A0A1B0GVV1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
SMIM35A0A1B0GVV1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms