Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
TNFSF12-TNFSF13A0A0A6YY99 MIR639-201ENST00000384974 98 ntBASIC23.14■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.14■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.14■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.14■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 CR559946.2-201ENST00000623684 991 ntBASIC23.14■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.13■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.13■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.13■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 AC016575.1-201ENST00000607026 382 ntBASIC23.13■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.12■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.12■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.12■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.1■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 MIR4449-201ENST00000578365 66 ntBASIC23.08■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 AC142086.6-201ENST00000621154 1765 ntBASIC23.08■■□□□ 1.29
TNFSF12-TNFSF13A0A0A6YY99 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 AP002414.2-202ENST00000590929 1450 ntBASIC23.07■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 DUX4L13-201ENST00000554103 1267 ntBASIC23.07■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 DUX4L15-201ENST00000611059 1267 ntBASIC23.07■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 DUX4L23-201ENST00000615195 1269 ntBASIC23.07■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 DUX4L24-201ENST00000617576 1269 ntBASIC23.07■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 DUX4L22-201ENST00000618238 1269 ntBASIC23.07■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 DUX4L20-201ENST00000619712 1269 ntBASIC23.07■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 DUX4L21-201ENST00000622058 1269 ntBASIC23.07■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 DUX4L10-201ENST00000622460 1267 ntBASIC23.07■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 DUX4L25-201ENST00000624915 1269 ntBASIC23.07■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.07■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 AC110285.7-201ENST00000624417 1536 ntBASIC23.04■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.04■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.04■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.04■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.03■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.02■■□□□ 1.28
TNFSF12-TNFSF13A0A0A6YY99 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNFSF12-TNFSF13A0A0A6YY99 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.01■■□□□ 1.27
TNFSF12-TNFSF13A0A0A6YY99 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNFSF12-TNFSF13A0A0A6YY99 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.01■■□□□ 1.27
TNFSF12-TNFSF13A0A0A6YY99 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.01■■□□□ 1.27
TNFSF12-TNFSF13A0A0A6YY99 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
TNFSF12-TNFSF13A0A0A6YY99 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23■■□□□ 1.27
TNFSF12-TNFSF13A0A0A6YY99 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23■■□□□ 1.27
TNFSF12-TNFSF13A0A0A6YY99 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TNFSF12-TNFSF13A0A0A6YY99 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
TNFSF12-TNFSF13A0A0A6YY99 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TNFSF12-TNFSF13A0A0A6YY99 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
TNFSF12-TNFSF13A0A0A6YY99 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.99■■□□□ 1.27
TNFSF12-TNFSF13A0A0A6YY99 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.98■■□□□ 1.27
TNFSF12-TNFSF13A0A0A6YY99 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TNFSF12-TNFSF13A0A0A6YY99 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TNFSF12-TNFSF13A0A0A6YY99 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
TNFSF12-TNFSF13A0A0A6YY99 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.96■■□□□ 1.27
TNFSF12-TNFSF13A0A0A6YY99 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
TNFSF12-TNFSF13A0A0A6YY99 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.96■■□□□ 1.27
TNFSF12-TNFSF13A0A0A6YY99 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms