Protein–RNA interactions for Protein: Q9BYQ2

KRTAP9-4, Keratin-associated protein 9-4, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-4Q9BYQ2 ADGRF4-203ENST00000371220 3075 ntTSL 5 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 SELENOT-207ENST00000615547 3488 ntTSL 5 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 PTPRM-203ENST00000400060 5030 ntTSL 5 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 ZNF45-201ENST00000269973 3898 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 RBBP9-201ENST00000337227 3861 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 RAPGEF6-215ENST00000627212 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 AC009108.3-201ENST00000602739 3515 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 SART3-201ENST00000228284 4004 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 MED23-202ENST00000368053 2811 ntTSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 XDH-201ENST00000379416 5688 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 ATF7IP-221ENST00000543189 4887 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 ABCB4-206ENST00000453593 3699 ntTSL 5 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 ECM2-201ENST00000344604 3253 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 SLC6A12-202ENST00000397296 3294 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 KBTBD11-OT1-204ENST00000635855 6169 ntAPPRIS P5 TSL 5 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 LARS-212ENST00000510191 3737 ntTSL 2 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 MYOM2-212ENST00000523438 3328 ntTSL 2 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 TRIM44-201ENST00000299413 12964 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 ADGRG5-201ENST00000340339 3767 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 CELF2-205ENST00000542579 7982 ntTSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 BTBD7-202ENST00000334746 8430 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 SLC12A3-203ENST00000563236 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 SOCS4-202ENST00000395472 6779 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 PRYP4-201ENST00000306589 444 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 RNU1-28P-201ENST00000383861 164 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 RNU1-27P-201ENST00000383869 164 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 RNU1-1-201ENST00000383925 164 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 RNVU1-18-201ENST00000384010 164 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 RNU1-2-201ENST00000384278 164 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 RNU1-4-201ENST00000384659 164 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 RNU1-3-201ENST00000384782 164 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 SNORD116.2-201ENST00000391251 93 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 FCAR-207ENST00000391725 830 ntTSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 Metazoa_SRP.7-201ENST00000392674 281 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 NUPR1-202ENST00000395641 550 ntTSL 2 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 TDGF1P4-201ENST00000401555 520 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 RPL18AP14-201ENST00000417685 526 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 MYL6BP1-201ENST00000429485 615 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 RN7SKP241-201ENST00000464584 291 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 GM2AP2-201ENST00000491764 562 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 RN7SL504P-201ENST00000494496 287 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 PAX8-211ENST00000497038 816 ntTSL 5 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 RNU6-1089P-201ENST00000516473 104 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 RNU7-53P-201ENST00000516705 60 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 RNU4-60P-201ENST00000517239 135 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 IGLV3-17-201ENST00000519099 244 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 MRPL40P1-201ENST00000542687 604 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 MYL6-211ENST00000548580 528 ntTSL 2 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 MYL6-213ENST00000549017 502 ntTSL 3 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 MIR4301-201ENST00000577203 66 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 AC011474.3-201ENST00000587520 250 ntTSL 5 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 PRYP3-202ENST00000607210 444 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 U1.40-201ENST00000610976 164 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 TNFAIP3-208ENST00000615468 3818 ntTSL 5 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 U1.27-201ENST00000615842 164 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 RFPL3-AS1_1.1-201ENST00000617561 88 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 AC141557.2-201ENST00000621330 482 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 AP000346.3-201ENST00000622821 210 ntBASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 ZNF41-201ENST00000313116 4297 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 GABRA1-203ENST00000428797 4285 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 EZH2-205ENST00000476773 2572 ntTSL 2 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 HAPLN1-201ENST00000274341 5607 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 CACNB2-204ENST00000377315 3461 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 GIT2-205ENST00000457474 5291 ntTSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 EIF1AX-202ENST00000379607 4427 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 ANO1-209ENST00000531349 3552 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 FP565260.7-201ENST00000623998 3634 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 LINC01761-201ENST00000424943 2755 ntTSL 2 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 AMOTL1-202ENST00000317829 8844 ntTSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 FAM107B-206ENST00000378470 3316 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 FANCM-202ENST00000542564 6167 ntTSL 1 (best) BASIC2.58□□□□□ -2
KRTAP9-4Q9BYQ2 GSN-AS1-201ENST00000414544 4763 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms