RNA–Protein interactions for RNA: ENST00000344604.9

ECM2-201, Transcript of extracellular matrix protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM2, Length 3,253 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM2-201ENST00000344604 NISCHQ9Y2I1 1504 aa18.9■□□□□ 0.62
ECM2-201ENST00000344604 PELP1Q8IZL8 1130 aaKnown RBP17.05■□□□□ 0.32
ECM2-201ENST00000344604 DCAF8L2P0C7V8 631 aa16.84■□□□□ 0.29
ECM2-201ENST00000344604 MYT1Q01538 1121 aa16.81■□□□□ 0.28
ECM2-201ENST00000344604 ABCC9O60706 1549 aa16.81■□□□□ 0.28
ECM2-201ENST00000344604 CCDC180Q9P1Z9 1646 aa16.4■□□□□ 0.22
ECM2-201ENST00000344604 TTBK1Q5TCY1 1321 aaPredicted RBP16.15■□□□□ 0.18
ECM2-201ENST00000344604 PABPN1Q86U42 306 aaKnown RBP eCLIP15.99■□□□□ 0.15
ECM2-201ENST00000344604 PRKCSHP14314 528 aaPredicted RBP15.93■□□□□ 0.14
ECM2-201ENST00000344604 SHROOM4Q9ULL8 1493 aa15.77■□□□□ 0.12
ECM2-201ENST00000344604 RB1CC1Q8TDY2 1594 aa15.71■□□□□ 0.11
ECM2-201ENST00000344604 ZCCHC6Q5VYS8 1495 aaKnown RBP15.66■□□□□ 0.1
ECM2-201ENST00000344604 NACADO15069 1562 aa15.61■□□□□ 0.09
ECM2-201ENST00000344604 ERICH6Q7L0X2 663 aa15.6■□□□□ 0.09
ECM2-201ENST00000344604 HRCP23327 699 aa15.57■□□□□ 0.08
ECM2-201ENST00000344604 SLC24A1O60721 1099 aa15.56■□□□□ 0.08
ECM2-201ENST00000344604 SCRIBQ14160 1630 aa15.53■□□□□ 0.08
ECM2-201ENST00000344604 DNAJC5BQ9UF47 199 aa15.51■□□□□ 0.07
ECM2-201ENST00000344604 BCL11AQ9H165 835 aa15.49■□□□□ 0.07
ECM2-201ENST00000344604 APLP2Q06481 763 aa15.45■□□□□ 0.06
ECM2-201ENST00000344604 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
ECM2-201ENST00000344604 DCAF1Q9Y4B6 1507 aa15.29■□□□□ 0.04
ECM2-201ENST00000344604 FAM9AQ8IZU1 332 aaPredicted RBP15.28■□□□□ 0.04
ECM2-201ENST00000344604 MYO15BQ96JP2 1530 aa15.27■□□□□ 0.03
ECM2-201ENST00000344604 UNC13AQ9UPW8 1703 aa15.24■□□□□ 0.03
ECM2-201ENST00000344604 BICRAQ9NZM4 1560 aa15.21■□□□□ 0.03
ECM2-201ENST00000344604 PPARGC1BQ86YN6 1023 aaKnown RBP15.2■□□□□ 0.02
ECM2-201ENST00000344604 CENPBP07199 599 aaPredicted RBP14.98□□□□□ -0.01
ECM2-201ENST00000344604 CECR2Q9BXF3 1484 aa14.98□□□□□ -0.01
ECM2-201ENST00000344604 SUPT5HO00267 1087 aaKnown RBP14.97□□□□□ -0.01
ECM2-201ENST00000344604 EIF4G1Q04637 1599 aaKnown RBP14.91□□□□□ -0.02
ECM2-201ENST00000344604 CC2D2AQ9P2K1 1620 aa14.89□□□□□ -0.03
ECM2-201ENST00000344604 DAXXQ9UER7 740 aaPredicted RBP14.85□□□□□ -0.03
ECM2-201ENST00000344604 EIF5BO60841 1220 aaKnown RBP14.72□□□□□ -0.05
ECM2-201ENST00000344604 MROH2BQ7Z745 1585 aa14.71□□□□□ -0.05
ECM2-201ENST00000344604 ACIN1Q9UKV3 1341 aaKnown RBP14.7□□□□□ -0.06
ECM2-201ENST00000344604 PCGF6Q9BYE7 350 aa14.68□□□□□ -0.06
ECM2-201ENST00000344604 GTF3C3Q9Y5Q9 886 aa14.68□□□□□ -0.06
ECM2-201ENST00000344604 ATAD2BQ9ULI0 1458 aa14.64□□□□□ -0.07
ECM2-201ENST00000344604 BAZ1AQ9NRL2 1556 aaPredicted RBP14.61□□□□□ -0.07
ECM2-201ENST00000344604 ANP32EQ9BTT0 268 aa14.61□□□□□ -0.07
ECM2-201ENST00000344604 SMARCA4P51532 1647 aa14.6□□□□□ -0.07
ECM2-201ENST00000344604 BAZ1BQ9UIG0 1483 aaKnown RBP14.6□□□□□ -0.07
ECM2-201ENST00000344604 NEUROD1Q13562 356 aa14.57□□□□□ -0.08
ECM2-201ENST00000344604 RSF1Q96T23 1441 aaPredicted RBP14.57□□□□□ -0.08
ECM2-201ENST00000344604 WIZO95785 1651 aa14.54□□□□□ -0.08
ECM2-201ENST00000344604 NCAPD3P42695 1498 aa14.51□□□□□ -0.09
ECM2-201ENST00000344604 NESP48681 1621 aa14.5□□□□□ -0.09
ECM2-201ENST00000344604 SMARCA2P51531 1590 aa14.49□□□□□ -0.09
ECM2-201ENST00000344604 CSRNP3Q8WYN3 585 aa14.48□□□□□ -0.09
ECM2-201ENST00000344604 ERCC6Q03468 1493 aa14.47□□□□□ -0.09
ECM2-201ENST00000344604 PLEKHG5O94827 1062 aa14.42□□□□□ -0.1
ECM2-201ENST00000344604 ANO8Q9HCE9 1232 aaPredicted RBP14.38□□□□□ -0.11
ECM2-201ENST00000344604 ZEB1P37275 1124 aaPredicted RBP14.33□□□□□ -0.12
ECM2-201ENST00000344604 UBE2Q2Q8WVN8 375 aa14.32□□□□□ -0.12
ECM2-201ENST00000344604 HMGXB3Q12766 1538 aa14.3□□□□□ -0.12
ECM2-201ENST00000344604 CADPSQ9ULU8 1353 aa14.28□□□□□ -0.12
ECM2-201ENST00000344604 CCDC88BA6NC98 1476 aa14.25□□□□□ -0.13
ECM2-201ENST00000344604 PEG3Q9GZU2 1588 aa14.22□□□□□ -0.13
ECM2-201ENST00000344604 PODXL2Q9NZ53 605 aa14.2□□□□□ -0.14
ECM2-201ENST00000344604 PDS5BQ9NTI5 1447 aa14.2□□□□□ -0.14
ECM2-201ENST00000344604 TOP2AP11388 1531 aaKnown RBP14.19□□□□□ -0.14
ECM2-201ENST00000344604 FBLN2P98095 1184 aa14.14□□□□□ -0.15
ECM2-201ENST00000344604 FANCD2Q9BXW9 1451 aa14.13□□□□□ -0.15
ECM2-201ENST00000344604 PKNOX2Q96KN3 472 aa14.09□□□□□ -0.15
ECM2-201ENST00000344604 EHMT2Q96KQ7 1210 aa14.08□□□□□ -0.16
ECM2-201ENST00000344604 CEP164Q9UPV0 1460 aa14.07□□□□□ -0.16
ECM2-201ENST00000344604 CFTRP13569 1480 aa14.06□□□□□ -0.16
ECM2-201ENST00000344604 LAMC3Q9Y6N6 1575 aa14.05□□□□□ -0.16
ECM2-201ENST00000344604 CCDC136Q96JN2 1154 aa14.04□□□□□ -0.16
ECM2-201ENST00000344604 KIF21AQ7Z4S6 1674 aa14.03□□□□□ -0.16
ECM2-201ENST00000344604 SALL2Q9Y467 1007 aaPredicted RBP14.02□□□□□ -0.16
ECM2-201ENST00000344604 MRC2Q9UBG0 1479 aa13.96□□□□□ -0.17
ECM2-201ENST00000344604 TDRD9Q8NDG6 1382 aaKnown RBP13.95□□□□□ -0.18
ECM2-201ENST00000344604 URB2Q14146 1524 aaKnown RBP13.92□□□□□ -0.18
ECM2-201ENST00000344604 TRIM41Q8WV44 630 aa13.91□□□□□ -0.18
ECM2-201ENST00000344604 TSHZ2Q9NRE2 1034 aa13.9□□□□□ -0.18
ECM2-201ENST00000344604 RAD54L2Q9Y4B4 1467 aa13.88□□□□□ -0.19
ECM2-201ENST00000344604 ABCC8Q09428 1581 aa13.88□□□□□ -0.19
ECM2-201ENST00000344604 AQRO60306 1485 aaKnown RBP eCLIP13.86□□□□□ -0.19
ECM2-201ENST00000344604 CUX2O14529 1486 aa13.86□□□□□ -0.19
ECM2-201ENST00000344604 RANGAP1P46060 587 aaPredicted RBP13.85□□□□□ -0.19
ECM2-201ENST00000344604 ZNF608Q9ULD9 1512 aaPredicted RBP13.84□□□□□ -0.19
ECM2-201ENST00000344604 SOGA1O94964 1423 aa13.84□□□□□ -0.19
ECM2-201ENST00000344604 THOC2Q8NI27 1593 aaKnown RBP13.84□□□□□ -0.19
ECM2-201ENST00000344604 TOPBP1Q92547 1522 aa13.83□□□□□ -0.19
ECM2-201ENST00000344604 TRIM26Q12899 539 aaPredicted RBP13.83□□□□□ -0.2
ECM2-201ENST00000344604 CHMP7Q8WUX9 453 aaPredicted RBP13.83□□□□□ -0.2
ECM2-201ENST00000344604 WRNQ14191 1432 aaPredicted RBP eCLIP13.8□□□□□ -0.2
ECM2-201ENST00000344604 DNAJC5Q9H3Z4 198 aa13.8□□□□□ -0.2
ECM2-201ENST00000344604 ERICH6BQ5W0A0 696 aa13.79□□□□□ -0.2
ECM2-201ENST00000344604 OSCARQ8IYS5 282 aa13.79□□□□□ -0.2
ECM2-201ENST00000344604 DIEXFQ68CQ4 756 aaKnown RBP13.78□□□□□ -0.2
ECM2-201ENST00000344604 YTHDC1Q96MU7 727 aaKnown RBP13.78□□□□□ -0.2
ECM2-201ENST00000344604 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.78□□□□□ -0.2
ECM2-201ENST00000344604 FGD5Q6ZNL6 1462 aa13.77□□□□□ -0.2
ECM2-201ENST00000344604 POLA1P09884 1462 aaPredicted RBP13.76□□□□□ -0.21
ECM2-201ENST00000344604 WDR62O43379 1518 aa13.76□□□□□ -0.21
ECM2-201ENST00000344604 CUX1P39880 1505 aa13.74□□□□□ -0.21
ECM2-201ENST00000344604 NEFLP07196 543 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms